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Coa5
Gene Detail
Symbol

Name
ID
Coa5
cytochrome C oxidase assembly factor 5
MGI:1923428
Synonyms
1700001A24Rik, 6330578E17Rik, Pet191
Feature Type
protein coding gene
Genetic Map
Chromosome 1
15.46 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr1:37417084-37430103 bp, - strand
From VEGA annotation of GRCm38

  13020 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:82943  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: COA5
Gene Tree: Coa5

Human
homologs
COA5, cytochrome C oxidase assembly factor 5
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 493753
neXtProt AC: NX_Q86WW8

Human Synonyms: 6330578E17Rik, C2orf64, Pet191

Human Chr (Location): chr2:98599323-98608518 (-)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human COA5

Mutations,
alleles, and
phenotypes
All mutations/alleles(9) : Gene trapped(4) Targeted(5)
Incidental mutations (data from APF , CvDC )
Interactions
Coa5 interacts with 326 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component mitochondrion
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (88)    Tissues (15)    Images (21)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 88
cDNA source data(120)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase coa5    NEW 
Molecular
reagents
All nucleic(120) cDNA(120)
Microarray probesets(5)
Other database
links
VEGA Gene Model OTTMUSG00000022117 (Evidence)
Ensembl Gene Model ENSMUSG00000026112 (Evidence)
Entrez Gene 76178 (Evidence)
UniGene 28085
DFCI TC1574459, TC1621004, TC1704009, TC1605535, TC1576868
DoTS DT.60118683, DT.94137634, DT.101150776
NIA Mouse Gene Index U021243
Consensus CDS Project CCDS35541.1
International Mouse Phenotyping Consortium Status Coa5
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022117 VEGA Gene Model | MGI Sequence Detail 13020 C57BL/6J ±  kb
transcript OTTMUST00000052497 VEGA | MGI Sequence Detail 3863 Not Applicable 
polypeptide OTTMUSP00000024901 VEGA | MGI Sequence Detail 74 Not Applicable 

For the selected sequences
All sequences(46) RefSeq(2) UniProt(2)
Polymorphisms
SNPs within 2kb(114 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR018793 Cytochrome c oxidase assembly protein PET191
Protein Ontology PR:000032383 cytochrome c oxidase assembly factor 5
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(33)
Other
accession IDs
MGI:1922068

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/28/2015
MGI 5.22
The Jackson Laboratory