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Ccdc138 Gene Detail
Summary
  • Symbol
    Ccdc138
  • Name
    coiled-coil domain containing 138
  • Synonyms
    6230424H07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923388
    NCBI Gene: 76138
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:58497948-58576244 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 29.35 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    189 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923388
protein coding gene Chr10:58497700-58576244 (.)
129S1/SvImJ MGP_129S1SvImJ_G0017248
protein coding gene Chr10:57604941-57697497 (+)
A/J MGP_AJ_G0017225
protein coding gene Chr10:55938620-56014034 (+)
AKR/J MGP_AKRJ_G0017184
protein coding gene Chr10:57393065-57478733 (+)
BALB/cJ MGP_BALBcJ_G0017186
protein coding gene Chr10:56025004-56100859 (+)
C3H/HeJ MGP_C3HHeJ_G0017009
protein coding gene Chr10:57313262-57390971 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017644
protein coding gene Chr10:59701208-59793048 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015335
protein coding gene Chr10:53048949-53107633 (+)
CAST/EiJ MGP_CASTEiJ_G0016580
protein coding gene Chr10:57238412-57314936 (+)
CBA/J MGP_CBAJ_G0016981
protein coding gene Chr10:61837924-61922875 (+)
DBA/2J MGP_DBA2J_G0017086
protein coding gene Chr10:55268921-55342611 (+)
FVB/NJ MGP_FVBNJ_G0017080
protein coding gene Chr10:54504914-54573697 (+)
LP/J MGP_LPJ_G0017161
protein coding gene Chr10:58001300-58076539 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017108
protein coding gene Chr10:64398047-64475856 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017681
protein coding gene Chr10:57206754-57287571 (+)
PWK/PhJ MGP_PWKPhJ_G0016363
protein coding gene Chr10:55045163-55119334 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016148
protein coding gene Chr10:56572705-56648101 (+)
WSB/EiJ MGP_WSBEiJ_G0016644
protein coding gene Chr10:57106230-57184202 (+)



Homology
more
  • Human Ortholog
    CCDC138, coiled-coil domain containing 138
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CCDC138, coiled-coil domain containing 138
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 165055
    neXtProt AC: NX_Q96M89
    UniProt: Q96M89

  • Chr Location
    2q13; chr2:108786730-108885485 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000038010 Ensembl Gene Model | MGI Sequence Detail 78297 C57BL/6J ±  kb
transcript ENSMUST00000036576 Ensembl | MGI Sequence Detail 2455 Not Applicable  
polypeptide ENSMUSP00000043040 Ensembl | MGI Sequence Detail 680 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 1
Other
Accession IDs
less
MGI:2652876
References
more
  • Summaries
    All 27
    Phenotypes 9
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory