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Ccdc138 Gene Detail
Summary
  • Symbol
    Ccdc138
  • Name
    coiled-coil domain containing 138
  • Synonyms
    6230424H07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923388
    NCBI Gene: 76138
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:58497948-58576244 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 29.35 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    189 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923388
protein coding gene Chr10:58497699-58576244 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017248
protein coding gene Chr10:57604941-57697497 (+)
A/J MGP_AJ_G0017225
protein coding gene Chr10:55938620-56014034 (+)
AKR/J MGP_AKRJ_G0017184
protein coding gene Chr10:57393065-57478733 (+)
BALB/cJ MGP_BALBcJ_G0017186
protein coding gene Chr10:56025004-56100859 (+)
C3H/HeJ MGP_C3HHeJ_G0017009
protein coding gene Chr10:57313262-57390971 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017644
protein coding gene Chr10:59701208-59793048 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015335
protein coding gene Chr10:53048949-53107633 (+)
CAST/EiJ MGP_CASTEiJ_G0016580
protein coding gene Chr10:57238412-57314936 (+)
CBA/J MGP_CBAJ_G0016981
protein coding gene Chr10:61837924-61922875 (+)
DBA/2J MGP_DBA2J_G0017086
protein coding gene Chr10:55268921-55342611 (+)
FVB/NJ MGP_FVBNJ_G0017080
protein coding gene Chr10:54504914-54573697 (+)
LP/J MGP_LPJ_G0017161
protein coding gene Chr10:58001300-58076539 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017108
protein coding gene Chr10:64398047-64475856 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017681
protein coding gene Chr10:57206754-57287571 (+)
PWK/PhJ MGP_PWKPhJ_G0016363
protein coding gene Chr10:55045163-55119334 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016148
protein coding gene Chr10:56572705-56648101 (+)
WSB/EiJ MGP_WSBEiJ_G0016644
protein coding gene Chr10:57106230-57184202 (+)



Homology
more
  • Human Ortholog
    CCDC138, coiled-coil domain containing 138
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CCDC138, coiled-coil domain containing 138
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 165055
    neXtProt AC: NX_Q96M89
    UniProt: Q96M89

  • Chr Location
    2q13; chr2:108786730-108885485 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000038010 Ensembl Gene Model | MGI Sequence Detail 78297 C57BL/6J ±  kb
transcript ENSMUST00000036576 Ensembl | MGI Sequence Detail 2455 Not Applicable  
polypeptide ENSMUSP00000043040 Ensembl | MGI Sequence Detail 680 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 1
Other
Accession IDs
less
MGI:2652876
References
more
  • Summaries
    All 27
    Phenotypes 9
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/23/2020
MGI 6.15
The Jackson Laboratory