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Sp110
Gene Detail
Symbol

Name
ID
Sp110
Sp110 nuclear body protein
MGI:1923364
Synonyms
5031415C07Rik, 52kDa, 5830484A20Rik, Ifi75, Ipr1
Feature Type
protein coding gene
Genetic Map
Chromosome 1
43.60 cM
Detailed Genetic Map ± 1 cM


Mapping data(4)
Sequence Map
Chr1:85576899-85598817 bp, - strand
From VEGA annotation of GRCm38

  21919 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:82192  Vertebrate Homology Class
1 human; 3 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: Sp110

Human
homologs
Human Homolog SP110, SP110 nuclear body protein
NCBI Gene ID 3431
neXtProt AC  NX_Q9HB58
Human Synonyms  IFI41, IFI75, IPR1, VODI
Human Chr (Location)  2q37.1; chr2:230168918-230225729 (-)  GRCh38
Disease Associations  (2) Diseases Associated with Human SP110
Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Sp110 interacts with 46 markers (Mir19a, Mir30c-1, Mir122, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (14 annotations)
Process apoptotic process, chromatin remodeling, ...
Component nucleolus, nucleus
Function chromatin binding, DNA binding
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (19)    Tissues (15)    Images (8)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 19
cDNA source data(13)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(15) Genomic(2) cDNA(13)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000024589 (Evidence)
Ensembl Gene ModelENSMUSG00000070034 (Evidence)
Entrez Gene109032 (Evidence)
DFCITC1632883, TC1618924, TC1615437, TC1590153, TC1587552, TC1576600
PDB1UFN
Consensus CDS ProjectCCDS35637.1
International Mouse Knockout Project StatusSp110
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024589 VEGA Gene Model | MGI Sequence Detail 21919 C57BL/6J ±  kb
transcript OTTMUST00000060409 VEGA | MGI Sequence Detail 1921 Not Applicable 
polypeptide OTTMUSP00000029465 VEGA | MGI Sequence Detail 445 Not Applicable 

For the selected sequences
All sequences(70) RefSeq(18) UniProt(3)
Polymorphisms
SNPs within 2kb(175 from dbSNP Build 137)    SNPs within 2kb including multiple locations(221)
Protein-related
information
ResourceIDDescription
InterPro IPR000770 SAND domain
InterPro IPR010919 SAND domain-like
InterPro IPR004865 Sp100
Protein Ontology PR:000015437 Sp110 nuclear body protein
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(34)
Other
accession IDs
MGI:1890488, MGI:1926064

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory