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Ttpal Gene Detail
Summary
  • Symbol
    Ttpal
  • Name
    tocopherol (alpha) transfer protein-like
  • Synonyms
    3110080A02Rik, 5830472M02Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923330
    NCBI Gene: 76080
  • Gene Overview
    MyGene.info: TTPAL
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:163602314-163619013 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 84.37 cM, cytoband H3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    175 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923330
protein coding gene Chr2:163602281-163619013 (.)
129S1/SvImJ MGP_129S1SvImJ_G0026826
protein coding gene Chr2:168957793-168976224 (+)
A/J MGP_AJ_G0026792
protein coding gene Chr2:162144644-162161651 (+)
AKR/J MGP_AKRJ_G0026763
protein coding gene Chr2:166937900-166954467 (+)
BALB/cJ MGP_BALBcJ_G0026801
protein coding gene Chr2:162470801-162486107 (+)
C3H/HeJ MGP_C3HHeJ_G0026543
protein coding gene Chr2:167289528-167310344 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027249
protein coding gene Chr2:173882206-173903217 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024619
protein coding gene Chr2:155447714-155464262 (+)
CAST/EiJ MGP_CASTEiJ_G0026004
protein coding gene Chr2:167684796-167702079 (+)
CBA/J MGP_CBAJ_G0026520
protein coding gene Chr2:180168591-180185089 (+)
DBA/2J MGP_DBA2J_G0026658
protein coding gene Chr2:161313516-161330405 (+)
FVB/NJ MGP_FVBNJ_G0026624
protein coding gene Chr2:159685911-159702708 (+)
LP/J MGP_LPJ_G0026761
protein coding gene Chr2:169083414-169099861 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026646
protein coding gene Chr2:183822361-183838860 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027305
protein coding gene Chr2:166832411-166849551 (+)
PWK/PhJ MGP_PWKPhJ_G0025738
protein coding gene Chr2:160875010-160893015 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025541
protein coding gene Chr2:165702645-165720746 (+)
WSB/EiJ MGP_WSBEiJ_G0026074
protein coding gene Chr2:167684011-167701082 (+)



Homology
more
  • Human Ortholog
    TTPAL, alpha tocopherol transfer protein like
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TTPAL, alpha tocopherol transfer protein like
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C20orf121
  • Links
    NCBI Gene ID: 79183
    neXtProt AC: NX_Q9BTX7
    UniProt: Q9BTX7

  • Chr Location
    20q13.12; chr20:44475886-44494603 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 41562
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: TTPAL
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000017679 Ensembl Gene Model | MGI Sequence Detail 16700 C57BL/6J ±  kb
transcript ENSMUST00000171696 Ensembl | MGI Sequence Detail 4522 Not Applicable  
polypeptide ENSMUSP00000128922 Ensembl | MGI Sequence Detail 343 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 76
    cDNA 76

    Microarray probesets 3
Other
Accession IDs
less
MGI:1920474
References
more
  • Summaries
    All 26
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory