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Isy1 Gene Detail
Summary
  • Symbol
    Isy1
  • Name
    ISY1 splicing factor homolog
  • Synonyms
    5830446M03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923310
    NCBI Gene: 57905
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:87818447-87838759 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 39.13 cM, cytoband D2
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    46 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923310
protein coding gene Chr6:87814269-87838798 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031000
protein coding gene Chr6:89182236-89211426 (-)
A/J MGP_AJ_G0030966
protein coding gene Chr6:85738697-85765484 (-)
AKR/J MGP_AKRJ_G0030897
protein coding gene Chr6:88217348-88241590 (-)
BALB/cJ MGP_BALBcJ_G0030979
protein coding gene Chr6:85733646-85758541 (-)
C3H/HeJ MGP_C3HHeJ_G0030731
protein coding gene Chr6:96227032-96254478 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031436
protein coding gene Chr6:91570357-91598025 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028619
protein coding gene Chr6:83911231-83936991 (-)
CAST/EiJ MGP_CASTEiJ_G0030088
protein coding gene Chr6:88297806-88325685 (-)
CBA/J MGP_CBAJ_G0030663
protein coding gene Chr6:95114708-95146853 (-)
DBA/2J MGP_DBA2J_G0030819
protein coding gene Chr6:85038592-85063167 (-)
FVB/NJ MGP_FVBNJ_G0030772
protein coding gene Chr6:84226110-84253419 (-)
LP/J MGP_LPJ_G0030896
protein coding gene Chr6:89200870-89225242 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030805
protein coding gene Chr6:99250937-99276601 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031463
protein coding gene Chr6:88070523-88097167 (-)
PWK/PhJ MGP_PWKPhJ_G0029803
protein coding gene Chr6:84006932-84031655 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029631
protein coding gene Chr6:86886291-86910085 (-)
WSB/EiJ MGP_WSBEiJ_G0030169
protein coding gene Chr6:88522207-88546975 (-)



Homology
more
  • Human Ortholog
    ISY1, ISY1 splicing factor homolog
  • Vertebrate Orthologs
    9
  • Human Ortholog
    ISY1, ISY1 splicing factor homolog
    Orthology source: HGNC
  • Synonyms
    FSAP33
  • Links
    NCBI Gene ID: 57461
    neXtProt AC: NX_Q9ULR0
    UniProt: Q9ULR0

  • Chr Location
    3q21.3; chr3:129127416-129161230 (-)  GRCh38.p7

  • Human Ortholog
    ISY1-RAB43, ISY1-RAB43 readthrough
    Orthology source: HomoloGene
  • Synonyms
    ISY1
  • Links
    NCBI Gene ID: 100534599
    neXtProt AC: NX_Q9ULR0

  • Chr Location
    3q21.3; chr3:129087569-129161230 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 57905 NCBI Gene Model | MGI Sequence Detail 20313 C57BL/6J ±  kb
transcript NM_133934 RefSeq | MGI Sequence Detail 1620 C57BL/6  
polypeptide Q69ZQ2 UniProt | EBI | MGI Sequence Detail 285 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 3
Other
Accession IDs
less
MGI:1889387, MGI:2141605
References
more
  • Summaries
    All 30
    Gene Ontology 2
    Phenotypes 6
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory