Ganc
Gene Detail

Symbol Name ID

Ganc glucosidase, alpha; neutral C MGI:1923301

Synonyms

5830445O15Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 2

60.31 cM, cytoband F1
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr2:120403896-120461700 bp, + strand From VEGA annotation of GRCm38   57805 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:25627  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: lysosomal alpha-glucosidase
Gene Tree: Ganc

Human homologs

Human Homolog		GANC, glucosidase, alpha; neutral C
NCBI Gene ID		2595
neXtProt AC		NX_Q8TET4
Human Chr (Location)		15q15.2; chr15:42566366-42645864 (+)  GRCh37.p10

Alleles and phenotypes

All alleles(9) : Gene trapped(9)

Gene Ontology (GO) classifications

All GO classifications: (10 annotations)

Process	carbohydrate metabolic process, glucose metabolic process, ...
Component	cellular_component
Function	alpha-glucosidase activity, carbohydrate binding, ...

External Resources: FuncBase

Expression

Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)   
Theiler Stages: 22

Assay Type	Results
RNA in situ	94

cDNA source data(12)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(15) cDNA(14) Primer pair(1)
Microarray probesets(4)

Other database links

VEGA Gene Model	OTTMUSG00000015382 (Evidence)
Ensembl Gene Model	ENSMUSG00000062646 (Evidence)
Entrez Gene	76051 (Evidence)
EC	3.2.1.-
Consensus CDS Project	CCDS38211.1
International Mouse Knockout Project Status	Ganc

Sequences

Length	Strain/Species
genomic	OTTMUSG00000015382	VEGA Gene Model | MGI Sequence Detail	57805	C57BL/6J
transcript	OTTMUST00000036505	VEGA | MGI Sequence Detail	4780	Not Applicable
polypeptide	OTTMUSP00000016402	VEGA | MGI Sequence Detail	913	Not Applicable

All sequences(52) RefSeq(2) UniProt(4)

Polymorphisms

SNPs(259 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR000322	Glycoside hydrolase, family 31
InterPro	IPR025887	Glycoside hydrolase family 31, N-terminal domain
InterPro	IPR017853	Glycoside hydrolase, superfamily
InterPro	IPR011013	Glycoside hydrolase-type carbohydrate-binding
Protein Ontology	PR:000007838	neutral alpha-glucosidase C

References

(Earliest) J:441 Yasue M, et al., Chromosomal assignments of 23 biochemical loci of the rat by using rat x mouse somatic cell hybrids. Cytogenet Cell Genet. 1991;57(2-3):142-8
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(28)