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Ncapg2
Gene Detail
Symbol

Name
ID
Ncapg2
non-SMC condensin II complex, subunit G2
MGI:1923294
Synonyms
5830426I05Rik, Luzp5, mCAP-G2, Mtb
Feature Type
protein coding gene
Genetic Map
Chromosome 12
62.65 cM, cytoband F2
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr12:116405402-116463531 bp, + strand
From NCBI annotation of GRCm38

  58130 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:9820  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Ncapg2

Human
homologs
Human Homolog NCAPG2, non-SMC condensin II complex, subunit G2
NCBI Gene ID 54892
neXtProt AC  NX_Q86XI2
Human Synonyms  CAPG2, CAP-G2, hCAP-G2, LUZP5, MTB
Human Chr (Location)  7q36.3; chr7:158631169-158704831 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(16) : Gene trapped(15) Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
 
Homozygous null embryos exhibit impaired inner cell mass expansion and die shortly after implantation and prior to gastrulation and blood cell development.
 
Interactions
Ncapg2 interacts with 360 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process cell cycle, cell division, ...
Component membrane, nucleus
Function methylated histone binding, protein binding
External Resources: FuncBase
Expression
Literature Summary: (4 records)
Data Summary: Results (101)    Tissues (29)    Images (26)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 85
Northern blot 12
RT-PCR 4
cDNA source data(92)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(93) cDNA(92) Primer pair(1)
Microarray probesets(4)
Other database
links
Ensembl Gene ModelENSMUSG00000042029 (Evidence)
Entrez Gene76044 (Evidence)
UniGene491196
DFCITC1579604, TC1634755, TC1642773
DoTSDT.101715056, DT.110944953, DT.489672, DT.55180570
NIA Mouse Gene IndexU014484
Consensus CDS ProjectCCDS26212.1
International Mouse Knockout Project StatusNcapg2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 76044 NCBI Gene Model | MGI Sequence Detail 58130 C57BL/6J ±  kb
transcript NM_133762 RefSeq | MGI Sequence Detail 6604 C57BL/6 
polypeptide Q6DFV1 UniProt | EBI | MGI Sequence Detail 1138 Not Applicable 

For the selected sequences
All sequences(48) RefSeq(18) UniProt(3)
Polymorphisms
SNPs within 2kb(793 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR011989 Armadillo-like helical
InterPro IPR016024 Armadillo-type fold
InterPro IPR024741 Condensin-2 complex subunit G2
Protein Ontology PR:000011023 condensin-2 complex subunit G2
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:197462 Dillman AA, et al., mRNA expression, splicing and editing in the embryonic and adult mouse cerebral cortex. Nat Neurosci. 2013 Apr;16(4):499-506
All references(38)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory