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Ccdc125 Gene Detail
Summary
  • Symbol
    Ccdc125
  • Name
    coiled-coil domain containing 125
  • Synonyms
    5830436D01Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923291
    NCBI Gene: 76041
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:100669717-100697240 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 53.23 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    163 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923291
protein coding gene Chr13:100668934-100697240 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020891
protein coding gene Chr13:102599725-102627402 (+)
A/J MGP_AJ_G0020842
protein coding gene Chr13:98609587-98638528 (+)
AKR/J MGP_AKRJ_G0020817
protein coding gene Chr13:101644128-101662414 (+)
BALB/cJ MGP_BALBcJ_G0020842
protein coding gene Chr13:99347478-99365983 (+)
C3H/HeJ MGP_C3HHeJ_G0020631
protein coding gene Chr13:101343048-101372284 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021276
protein coding gene Chr13:105655283-105683608 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018846
protein coding gene Chr13:94432542-94461811 (+)
CAST/EiJ MGP_CASTEiJ_G0020150
protein coding gene Chr13:100810333-100844561 (+)
CBA/J MGP_CBAJ_G0020593
protein coding gene Chr13:109826017-109857230 (+)
DBA/2J MGP_DBA2J_G0020717
protein coding gene Chr13:98391651-98414601 (+)
FVB/NJ MGP_FVBNJ_G0020699
protein coding gene Chr13:97140663-97158980 (+)
LP/J MGP_LPJ_G0020791
protein coding gene Chr13:102615744-102645238 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020727
protein coding gene Chr13:110067789-110096422 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0021315
protein coding gene Chr13:101096846-101124821 (+)
PWK/PhJ MGP_PWKPhJ_G0019903
protein coding gene Chr13:97115985-97144780 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019725
protein coding gene Chr13:97323342-97353279 (+)
WSB/EiJ MGP_WSBEiJ_G0020208
protein coding gene Chr13:101557190-101588505 (+)



Homology
more
  • Human Ortholog
    CCDC125, coiled-coil domain containing 125
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CCDC125, coiled-coil domain containing 125
    Orthology source: HomoloGene, HGNC
  • Synonyms
    KENAE
  • Links
    NCBI Gene ID: 202243
    neXtProt AC: NX_Q86Z20
    UniProt: Q86Z20

  • Chr Location
    5q13.2; chr5:69273087-69333069 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000048924 Ensembl Gene Model | MGI Sequence Detail 27524 C57BL/6J ±  kb
transcript ENSMUST00000057325 Ensembl | MGI Sequence Detail 2413 Not Applicable  
polypeptide ENSMUSP00000058484 Ensembl | MGI Sequence Detail 500 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 2
Other
Accession IDs
less
MGI:2145321
References
more
  • Summaries
    All 23
    Gene Ontology 2
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory