Teddm2 Gene Detail

Summary

• Symbol
  Teddm2
• Name
  transmembrane epididymal family member 2
• Synonyms
  5830403L16Rik, e9-2

• Feature Type
  protein coding gene
• IDs
  MGI:1923273
  NCBI Gene: 240817
• Alliance
  gene page

Location & Maps

• Sequence Map
  Chr1:153849542-153900228 bp, - strand
• From VEGA annotation of GRCm38
  

  Mouse Genome Browser
  
  

• Download
  Sequence
    50687 bp   ±  kb flank
  
  
• Genome Browsers
  VEGA | Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 65.43 cM
• Mapping Data
  2 experiments

Homology

• Human Ortholog
  TEDDM2P, transmembrane epididymal protein 2, pseudogene

• Vertebrate Orthologs
  4

• Human Ortholog
  TEDDM2P, transmembrane epididymal protein 2, pseudogene
  Orthology source: HGNC
• Synonyms
  TEDDM1P1
• Links
  HGNC:42447

  NCBI Gene ID: 127671

  
  
• Chr Location
  1q25.3; chr1:182441697-182442451 (+)  GRCh38.p7

---

• HomoloGene
  Vertebrate Homology Class 65346
  1 mouse;1 rat;1 dog;1 macaque, rhesus
  
• HCOP
  human homology predictions: TEDDM2P
• Gene Tree
  Teddm2
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Targeted
  1
• Genomic Mutations
  2 involving Teddm2
• Incidental Mutations
  CvDC
• Find Mice (IMSR)
  1 strains or lines available

Gene Ontology
(GO)
Classifications

• External Resources
  FuncBase

Expression

• cDNA Data
  4

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Interactions

• Teddm2 interacts with 93 markers (Mir7-1, Mir17, Mir18, ...) View All

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  2
• UniProt
  6
• CCDS
  CCDS15378.1

• VEGA
  OTTMUSG00000033702 (Evidence)
• Ensembl
  ENSMUSG00000045968 (Evidence)
• NCBI Gene
  240817

Representative Sequences			Length	Strain/Species
genomic	OTTMUSG00000033702	VEGA Gene Model | MGI Sequence Detail	50687	C57BL/6J
transcript	OTTMUST00000084901	VEGA | MGI Sequence Detail	1654	Not Applicable
polypeptide	OTTMUSP00000045791	VEGA | MGI Sequence Detail	260	Not Applicable

Polymorphisms

• SNPs within 2kb
  435 from dbSNP Build 142

Protein
Information

• UniProt
  6 Sequences
• InterPro Domains
  IPR006904 Protein of unknown function DUF716 (TMEM45)

Molecular
Reagents

• All nucleic 4

  cDNA 4

  
  

  Microarray probesets 2

Other
Accession IDs

MGI:2675362

References

• Summaries
  All 22

  Phenotypes 3
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:121614 Davies B, et al., Novel epididymis-specific mRNAs downregulated by HE6/Gpr64 receptor gene disruption. Mol Reprod Dev. 2007 May;74(5):539-53