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5830411K02Rik Gene Detail
Summary
  • Symbol
    5830411K02Rik
  • Name
    RIKEN cDNA 5830411K02 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1923267
    NCBI Gene: 76017
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:107688171-107689167 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    58 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923267
unclassified gene Chr5:107688171-107689167 (+)
129S1/SvImJ MGP_129S1SvImJ_G0001684
unclassified gene Chr5:109733919-109734915 (+)
A/J MGP_AJ_G0001662
unclassified gene Chr5:105522528-105523524 (+)
AKR/J MGP_AKRJ_G0001650
unclassified gene Chr5:108930716-108931712 (+)
BALB/cJ MGP_BALBcJ_G0001659
unclassified gene Chr5:106656069-106657065 (+)
C3H/HeJ MGP_C3HHeJ_G0001638
unclassified gene Chr5:109376370-109377366 (+)
C57BL/6NJ MGP_C57BL6NJ_G0001778
unclassified gene Chr5:114220295-114221291 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0001452
unclassified gene Chr5:100582597-100583589 (+)
CAST/EiJ MGP_CASTEiJ_G0001610
unclassified gene Chr5:108316995-108317991 (+)
CBA/J MGP_CBAJ_G0001629
unclassified gene Chr5:118068761-118069757 (+)
DBA/2J MGP_DBA2J_G0001632
unclassified gene Chr5:105657835-105658831 (+)
FVB/NJ MGP_FVBNJ_G0001641
unclassified gene Chr5:104387767-104388763 (+)
LP/J MGP_LPJ_G0001688
unclassified gene Chr5:110319219-110320215 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0001623
unclassified gene Chr5:122967326-122968322 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0001768
unclassified gene Chr5:108494896-108495892 (+)
PWK/PhJ MGP_PWKPhJ_G0001568
unclassified gene Chr5:104465487-104466483 (+)
SPRET/EiJ MGP_SPRETEiJ_G0001534
unclassified gene Chr5:106002507-106003499 (+)
WSB/EiJ MGP_WSBEiJ_G0001629
unclassified gene Chr5:108787883-108788879 (+)



Homology
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105421 Ensembl Gene Model | MGI Sequence Detail 997 C57BL/6J ±  kb
transcript AK017920 GenBank | EMBL | DDBJ | MGI Sequence Detail 998 C57BL/6J  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory