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5033430I15Rik Gene Detail
Summary
  • Symbol
    5033430I15Rik
  • Name
    RIKEN cDNA 5033430I15 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1923250
    NCBI Gene: 76000
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:45965253-45966508 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 22.95 cM, cytoband B1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    7 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923250
lncRNA gene Chr13:45965062-45966508 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005457
lincRNA gene Chr13:44705966-44707221 (+)
A/J MGP_AJ_G0005443
lincRNA gene Chr13:43150985-43152240 (+)
AKR/J MGP_AKRJ_G0005422
lincRNA gene Chr13:44339962-44341217 (+)
BALB/cJ MGP_BALBcJ_G0005424
lincRNA gene Chr13:43357624-43358879 (+)
C3H/HeJ MGP_C3HHeJ_G0005372
lincRNA gene Chr13:44188852-44190107 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005579
lincRNA gene Chr13:46067923-46069178 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004956
lincRNA gene Chr13:41207683-41208945 (+)
CAST/EiJ MGP_CASTEiJ_G0005315
lincRNA gene Chr13:44138980-44140235 (+)
CBA/J MGP_CBAJ_G0005361
lincRNA gene Chr13:47986745-47988000 (+)
DBA/2J MGP_DBA2J_G0005377
lincRNA gene Chr13:42717331-42718586 (+)
FVB/NJ MGP_FVBNJ_G0005403
lincRNA gene Chr13:42237253-42238508 (+)
LP/J MGP_LPJ_G0005460
lincRNA gene Chr13:44929092-44930347 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005386
lincRNA gene Chr13:47829411-47830666 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005579
lincRNA gene Chr13:44034375-44035630 (+)
PWK/PhJ MGP_PWKPhJ_G0005264
lincRNA gene Chr13:42837789-42839044 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005184
lincRNA gene Chr13:42689425-42690665 (+)
WSB/EiJ MGP_WSBEiJ_G0005364
lincRNA gene Chr13:44345818-44347073 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000038152 Ensembl Gene Model | MGI Sequence Detail 1256 C57BL/6J ±  kb
transcript ENSMUST00000038032 Ensembl | MGI Sequence Detail 729 Not Applicable  
polypeptide Q9D3Q2 UniProt | EBI | MGI Sequence Detail 138 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 3
References
more
  • Summaries
    All 18
    Phenotypes 3
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory