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5033428I22Rik Gene Detail
Summary
  • Symbol
    5033428I22Rik
  • Name
    RIKEN cDNA 5033428I22 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1923246
    NCBI Gene: 75996
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:57332435-57354580 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 29.80 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    188 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923246
lncRNA gene Chr8:57332118-57354580 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007327
lincRNA gene Chr8:57044642-57053150 (+)
A/J MGP_AJ_G0007325
lincRNA gene Chr8:54649906-54658414 (+)
AKR/J MGP_AKRJ_G0007296
lincRNA gene Chr8:56272511-56281039 (+)
BALB/cJ MGP_BALBcJ_G0007303
lincRNA gene Chr8:54964587-54973086 (+)
C3H/HeJ MGP_C3HHeJ_G0007246
lincRNA gene Chr8:56929447-56937943 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007473
lincRNA gene Chr8:59234688-59245206 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006671
lincRNA gene Chr8:50198221-50206810 (+)
CAST/EiJ MGP_CASTEiJ_G0007148
lincRNA gene Chr8:56298254-56306399 (+)
CBA/J MGP_CBAJ_G0007229
lincRNA gene Chr8:61344034-61352741 (+)
DBA/2J MGP_DBA2J_G0007251
lincRNA gene Chr8:54460280-54469207 (+)
FVB/NJ MGP_FVBNJ_G0007272
lincRNA gene Chr8:53817061-53825592 (+)
LP/J MGP_LPJ_G0007332
lincRNA gene Chr8:57062659-57071165 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007249
lincRNA gene Chr8:62957700-62967319 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007475
lincRNA gene Chr8:56493403-56501871 (+)
PWK/PhJ MGP_PWKPhJ_G0007090
lincRNA gene Chr8:53764264-53772900 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006998
lincRNA gene Chr8:55373264-55382928 (+)
WSB/EiJ MGP_WSBEiJ_G0007208
lincRNA gene Chr8:56742475-56751094 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 75996 NCBI Gene Model | MGI Sequence Detail 22146 C57BL/6J ±  kb
transcript NR_131041 RefSeq | MGI Sequence Detail 952 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
References
more
  • Summaries
    All 10
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory