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Rab30 Gene Detail
Summary
  • Symbol
    Rab30
  • Name
    RAB30, member RAS oncogene family
  • Synonyms
    5033421K01Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923235
    NCBI Gene: 75985
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:92741714-92844535 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 51.60 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1016 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923235
protein coding gene Chr7:92741603-92844535 (.)
129S1/SvImJ MGP_129S1SvImJ_G0032514
protein coding gene Chr7:95304729-95395991 (+)
A/J MGP_AJ_G0032488
protein coding gene Chr7:92926275-93015770 (+)
AKR/J MGP_AKRJ_G0032424
protein coding gene Chr7:95143514-95235427 (+)
BALB/cJ MGP_BALBcJ_G0032499
protein coding gene Chr7:92596988-92683900 (+)
C3H/HeJ MGP_C3HHeJ_G0032214
protein coding gene Chr7:95505714-95606531 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032997
protein coding gene Chr7:98980590-99077018 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029992
protein coding gene Chr7:95711141-95796946 (+)
CAST/EiJ MGP_CASTEiJ_G0031541
protein coding gene Chr7:87000809-87093189 (+)
CBA/J MGP_CBAJ_G0032181
protein coding gene Chr7:102316202-102425192 (+)
DBA/2J MGP_DBA2J_G0032333
protein coding gene Chr7:91355568-91445425 (+)
FVB/NJ MGP_FVBNJ_G0032289
protein coding gene Chr7:91187241-91280332 (+)
LP/J MGP_LPJ_G0032422
protein coding gene Chr7:96550450-96646570 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0032323
protein coding gene Chr7:103458904-103550540 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033019
protein coding gene Chr7:94448495-94551516 (+)
PWK/PhJ MGP_PWKPhJ_G0031259
protein coding gene Chr7:84426462-84515348 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031102
protein coding gene Chr7:81763267-81855312 (+)
WSB/EiJ MGP_WSBEiJ_G0031658
protein coding gene Chr7:95110110-95200037 (+)



Homology
more
  • Human Ortholog
    RAB30, RAB30, member RAS oncogene family
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RAB30, RAB30, member RAS oncogene family
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 27314
    neXtProt AC: NX_Q15771
    UniProt: Q15771

  • Chr Location
    11q14.1; chr11:82973133-83071923 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    32 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 75985 NCBI Gene Model | MGI Sequence Detail 102822 C57BL/6J ±  kb
transcript NM_029494 RefSeq | MGI Sequence Detail 2007 Not Specified  
polypeptide Q923S9 UniProt | EBI | MGI Sequence Detail 203 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 3
Other
Accession IDs
less
MGI:2141909
References
more
  • Summaries
    All 56
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 32
  • Earliest
    J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory