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5031415H12Rik Gene Detail
Summary
  • Symbol
    5031415H12Rik
  • Name
    RIKEN cDNA 5031415H12 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1923234
    NCBI Gene: 75984
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:70745329-70755582 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    115 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923234
lncRNA gene Chr17:70745329-70755582 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005750
lincRNA gene Chr17:73140154-73150320 (-)
A/J MGP_AJ_G0005737
lincRNA gene Chr17:70910260-70920422 (-)
AKR/J MGP_AKRJ_G0005716
lincRNA gene Chr17:71892306-71904184 (-)
BALB/cJ MGP_BALBcJ_G0005717
lincRNA gene Chr17:70842756-70853458 (-)
C3H/HeJ MGP_C3HHeJ_G0005665
lincRNA gene Chr17:72833167-72844955 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005877
lincRNA gene Chr17:75795108-75806760 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0005607
lincRNA gene Chr17:73261501-73272389 (-)
CBA/J MGP_CBAJ_G0005653
lincRNA gene Chr17:78937691-78951349 (-)
DBA/2J MGP_DBA2J_G0005671
lincRNA gene Chr17:69610999-69621587 (-)
FVB/NJ MGP_FVBNJ_G0005697
lincRNA gene Chr17:69074584-69084735 (-)
LP/J MGP_LPJ_G0005752
lincRNA gene Chr17:73895882-73906062 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005682
lincRNA gene Chr17:78861634-78873100 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005877
lincRNA gene Chr17:72406365-72417566 (-)
PWK/PhJ MGP_PWKPhJ_G0005551
lincRNA gene Chr17:68900841-68911215 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005469
lincRNA gene Chr17:69121481-69133643 (-)
WSB/EiJ MGP_WSBEiJ_G0005659
lincRNA gene Chr17:73200277-73211697 (-)



Homology
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097282 Ensembl Gene Model | MGI Sequence Detail 10254 C57BL/6J ±  kb
transcript ENSMUST00000181546 Ensembl | MGI Sequence Detail 2481 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory