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5031425E22Rik Gene Detail
Summary
  • Symbol
    5031425E22Rik
  • Name
    RIKEN cDNA 5031425E22 gene
  • Synonyms
    BC050254
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1923227
    NCBI Gene: 102635844
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:23382308-23434269 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 10.33 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    463 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923227
lncRNA gene Chr5:23352650-23434269 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006590
lincRNA gene Chr5:21045727-21084398 (-)
A/J MGP_AJ_G0006583
lincRNA gene Chr5:20374767-20409214 (-)
AKR/J MGP_AKRJ_G0006553
lincRNA gene Chr5:21167835-21203277 (-)
BALB/cJ MGP_BALBcJ_G0006558
lincRNA gene Chr5:20857454-20894468 (-)
C3H/HeJ MGP_C3HHeJ_G0006505
lincRNA gene Chr5:21254151-21289465 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006722
lincRNA gene Chr5:22529192-22563682 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005991
lincRNA gene Chr5:18328863-18363997 (-)
CAST/EiJ MGP_CASTEiJ_G0006431
lincRNA gene Chr5:20454561-20493071 (-)
CBA/J MGP_CBAJ_G0006487
lincRNA gene Chr5:22838303-22877191 (-)
DBA/2J MGP_DBA2J_G0006508
lincRNA gene Chr5:20635238-20670789 (-)
FVB/NJ MGP_FVBNJ_G0006531
lincRNA gene Chr5:20033484-20067874 (-)
LP/J MGP_LPJ_G0006590
lincRNA gene Chr5:21429550-21465981 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006515
lincRNA gene Chr5:24030748-24066669 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006728
lincRNA gene Chr5:20760184-20796254 (-)
PWK/PhJ MGP_PWKPhJ_G0006369
lincRNA gene Chr5:19718699-19753486 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006280
lincRNA gene Chr5:20157987-20195840 (-)
WSB/EiJ MGP_WSBEiJ_G0006481
lincRNA gene Chr5:20858220-20893001 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    15 phenotype references
  • All Mutations and Alleles
    229
  • Chemically induced (other)
    2
  • Gene trapped
    225
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    4 involving 5031425E22Rik
  • Find Mice (IMSR)
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000073147 Ensembl Gene Model | MGI Sequence Detail 51962 C57BL/6J ±  kb
transcript ENSMUST00000101522 Ensembl | MGI Sequence Detail 2110 Not Applicable  
polypeptide Q3UTW8 UniProt | EBI | MGI Sequence Detail 154 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 4
Other
Accession IDs
less
MGI:3040684
References
more
  • Summaries
    All 33
    Diseases 1
    Phenotypes 15
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory