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Tmem56 Gene Detail
Summary
  • Symbol
    Tmem56
  • Name
    transmembrane protein 56
  • Synonyms
    4930577M16Rik, C730036B01Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923195
    NCBI Gene: 99887
Location & Maps
more
  • Sequence Map
    Chr3:121201761-121283098 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      81338 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 52.94 cM, cytoband G3
  • Mapping Data
    3 experiments
Homology
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  • Human Ortholog
    TMEM56, transmembrane protein 56
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TMEM56, transmembrane protein 56
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 148534
    neXtProt AC: NX_Q96MV1

  • Chr Location
    1p21.3; chr1:95092517-95197607 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    1
  • Gene trapped
    2
  • Radiation induced
    1
  • Targeted
    4
  • Genomic Mutations
    2 involving Tmem56
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000032849 VEGA Gene Model | MGI Sequence Detail 81338 C57BL/6J ±  kb
transcript OTTMUST00000081854 VEGA | MGI Sequence Detail 2230 Not Applicable  
polypeptide OTTMUSP00000043841 VEGA | MGI Sequence Detail 276 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    778 from dbSNP Build 142
Protein
Information
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  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000030662 transmembrane protein 56
  • InterPro Domains
    IPR006634 TRAM/LAG1/CLN8 homology domain
Molecular
Reagents
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  • All nucleic 14
    cDNA 13
    Primer pair 1

    Microarray probesets 9
Other
Accession IDs
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MGI:2139869, MGI:2139968
References
more
  • Summaries
    All 35
    Developmental Gene Expression 3
    Gene Ontology 2
    Phenotypes 9
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/13/2016
MGI 6.05
The Jackson Laboratory