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4930578C19Rik
Gene Detail
Symbol

Name
ID
4930578C19Rik
RIKEN cDNA 4930578C19 gene
MGI:1923155
Feature Type
protein coding gene
Genetic Map
Chromosome X
13.73 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
ChrX:18414881-18461397 bp, - strand
From VEGA annotation of GRCm38

  46517 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:23469  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

HCOP human homology predictions: CXorf36
Gene Tree: 4930578C19Rik

Human
homologs
CXorf36, chromosome X open reading frame 36
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 79742
neXtProt AC: NX_Q9H7Y0

Human Synonyms: 4930578C19Rik, bA435K1.1, DIA1R, EPQL1862, PRO3743

Human Chr (Location): Xp11.3; chrX:45148373-45200901 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Interactions
4930578C19Rik interacts with 111 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component extracellular region
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(6)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: GEISHA C1HXorf36    NEW 
Molecular
reagents
All nucleic(6) cDNA(6)
Microarray probesets(2)
Other database
links
VEGA Gene Model OTTMUSG00000017027 (Evidence)
Ensembl Gene Model ENSMUSG00000037358 (Evidence)
Entrez Gene 75905 (Evidence)
UniGene 159617
DFCI TC1591798
DoTS DT.91300275, DT.94257660
NIA Mouse Gene Index U039290
Consensus CDS Project CCDS30038.1
International Mouse Phenotyping Consortium Status 4930578C19Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017027 VEGA Gene Model | MGI Sequence Detail 46517 C57BL/6J ±  kb
transcript OTTMUST00000041264 VEGA | MGI Sequence Detail 1896 Not Applicable 
polypeptide OTTMUSP00000018505 VEGA | MGI Sequence Detail 435 Not Applicable 

For the selected sequences
All sequences(30) RefSeq(10) UniProt(2)
Polymorphisms
SNPs within 2kb(76 from dbSNP Build 137)    SNPs within 2kb including multiple locations(78)
Protein-related
information
ResourceIDDescription
InterPro IPR022049 Uncharacterised protein family FAM69
InterPro IPR020519 Uncharacterised protein family UPF0672
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(20)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory