Dcp1a
Gene Detail

Symbol Name ID

Dcp1a DCP1 decapping enzyme homolog A (S. cerevisiae) MGI:1923151

Synonyms

1110066A22Rik, 4930568L04Rik, D14Ertd817e, Mitc1, SMIF

Feature Type

protein coding gene

Genetic Map

Chromosome 14

18.75 cM, cytoband B
Detailed Genetic Map ± 1 cM


Mapping data(5)

Sequence Map

Chr14:30479565-30527056 bp, + strand From NCBI annotation of GRCm38   47492 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:10178  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Dcp1a

Human homologs

Human Homolog		DCP1A, DCP1 decapping enzyme homolog A (S. cerevisiae)
NCBI Gene ID		55802
neXtProt AC		NX_Q9NPI6
Human Synonyms		HSA275986, Nbla00360, SMAD4IP1, SMIF
Human Chr (Location)		3p21.1; chr3:53317443-53381654 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(14) : Targeted(2) Gene trapped(12)

Gene Ontology (GO) classifications

All GO classifications: (10 annotations)

Process	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, positive regulation of transcription, DNA-dependent, ...
Component	cytoplasm, cytoplasmic mRNA processing body, ...
Function	hydrolase activity, identical protein binding, ...

External Resources: FuncBase

Expression

Literature Summary: (12 records)
Data Summary: Results (35)    Tissues (23)    Images (2)
Theiler Stages: 15, 17, 19, 23, 28

Assay Type	Results
RNA in situ	30
Western blot	5

cDNA source data(120)
External Resources: GEO   ArrayExpress

Molecular reagents

All nucleic(121) cDNA(120) Primer pair(1)
Microarray probesets(5)

Other database links

Ensembl Gene Model	ENSMUSG00000021962 (Evidence)
Entrez Gene	75901 (Evidence)
UniGene	28733
DFCI	TC1576910, TC1605042, TC1606971, TC1610876, TC1629115
DoTS	DT.110754530, DT.531478, DT.97358323, DT.97362990
NIA Mouse Gene Index	U043386
EC	3.-.-.-
Consensus CDS Project	CCDS36848.1
International Mouse Knockout Project Status	Dcp1a

Sequences

Length	Strain/Species
genomic	75901	NCBI Gene Model | MGI Sequence Detail	47492	C57BL/6J
transcript	NM_133761	RefSeq | MGI Sequence Detail	5616	C57BL/6
polypeptide	Q91YD3	UniProt | EBI | MGI Sequence Detail	602	Not Applicable

All sequences(37) RefSeq(2) UniProt(2)

Polymorphisms

SNPs(275 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR010334	Dcp1-like decapping
Protein Ontology	PR:000006317	mRNA-decapping enzyme 1A

Graphical View of Protein Domain Structure

References

(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
All references(52)

Other accession IDs

MGI:1289310, MGI:1916184, MGI:2145732