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4930580E04Rik Gene Detail
Summary
  • Symbol
    4930580E04Rik
  • Name
    RIKEN cDNA 4930580E04 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1923106
    NCBI Gene: 75856
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:23387109-23388601 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    68 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923106
lncRNA gene Chr5:23387109-23388601 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006589
lincRNA gene Chr5:21033566-21035094 (+)
A/J MGP_AJ_G0006582
lincRNA gene Chr5:20362142-20363634 (+)
AKR/J MGP_AKRJ_G0006552
lincRNA gene Chr5:21151189-21152717 (+)
BALB/cJ MGP_BALBcJ_G0006557
lincRNA gene Chr5:20844699-20846227 (+)
C3H/HeJ MGP_C3HHeJ_G0006504
lincRNA gene Chr5:21240192-21241684 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006721
lincRNA gene Chr5:22516571-22518063 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005990
lincRNA gene Chr5:18316672-18318172 (+)
CAST/EiJ MGP_CASTEiJ_G0006430
lincRNA gene Chr5:20441872-20443348 (+)
CBA/J MGP_CBAJ_G0006486
lincRNA gene Chr5:22825670-22827162 (+)
DBA/2J MGP_DBA2J_G0006507
lincRNA gene Chr5:20622661-20624189 (+)
FVB/NJ MGP_FVBNJ_G0006530
lincRNA gene Chr5:20018746-20020274 (+)
LP/J MGP_LPJ_G0006589
lincRNA gene Chr5:21416005-21417533 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006514
lincRNA gene Chr5:24017991-24019519 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006727
lincRNA gene Chr5:20747427-20748955 (+)
PWK/PhJ MGP_PWKPhJ_G0006368
lincRNA gene Chr5:19701493-19702978 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006279
lincRNA gene Chr5:20145343-20146821 (+)
WSB/EiJ MGP_WSBEiJ_G0006480
lincRNA gene Chr5:20843989-20845517 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    2
  • Spontaneous
    1
  • Genomic Mutations
    3 involving 4930580E04Rik
  • Find Mice (IMSR)
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106269 Ensembl Gene Model | MGI Sequence Detail 1493 C57BL/6J ±  kb
transcript ENSMUST00000197377 Ensembl | MGI Sequence Detail 690 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 11
    Phenotypes 4
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory