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Ccdc173 Gene Detail
Summary
  • Symbol
    Ccdc173
  • Name
    coiled-coil domain containing 173
  • Synonyms
    4930525K21Rik, 4930578N16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923100
    NCBI Gene: 75051
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:69758033-69789575 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 40.95 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    144 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923100
protein coding gene Chr2:69757392-69789581 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025804
protein coding gene Chr2:69742348-69778959 (-)
A/J MGP_AJ_G0025781
protein coding gene Chr2:67057983-67089927 (-)
AKR/J MGP_AKRJ_G0025750
protein coding gene Chr2:68866068-68901286 (-)
BALB/cJ MGP_BALBcJ_G0025776
protein coding gene Chr2:67219437-67253100 (-)
C3H/HeJ MGP_C3HHeJ_G0025536
protein coding gene Chr2:69104597-69139590 (-)
C57BL/6NJ MGP_C57BL6NJ_G0026223
protein coding gene Chr2:71861766-71894887 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023626
protein coding gene Chr2:64284820-64321488 (-)
CAST/EiJ MGP_CASTEiJ_G0025000
protein coding gene Chr2:69217494-69253331 (-)
CBA/J MGP_CBAJ_G0025516
protein coding gene Chr2:74505216-74546769 (-)
DBA/2J MGP_DBA2J_G0025647
protein coding gene Chr2:66690522-66722527 (-)
FVB/NJ MGP_FVBNJ_G0025610
protein coding gene Chr2:66071776-66103239 (-)
LP/J MGP_LPJ_G0025736
protein coding gene Chr2:69597859-69630433 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025639
protein coding gene Chr2:76567735-76609181 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0026280
protein coding gene Chr2:68965324-68996241 (-)
PWK/PhJ MGP_PWKPhJ_G0024741
protein coding gene Chr2:66531763-66565173 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024548
protein coding gene Chr2:69175096-69221800 (-)
WSB/EiJ MGP_WSBEiJ_G0025068
protein coding gene Chr2:69384915-69420578 (-)



Homology
more
  • Human Ortholog
    CCDC173, coiled-coil domain containing 173
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CCDC173, coiled-coil domain containing 173
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C2orf77
  • Links
    NCBI Gene ID: 129881
    neXtProt AC: NX_Q0VFZ6
    UniProt: Q0VFZ6

  • Chr Location
    2q31.1; chr2:169645425-169694421 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    12
  • Chemically induced (other)
    1
  • Gene trapped
    9
  • Targeted
    2
  • Genomic Mutations
    1 involving Ccdc173
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000070883 Ensembl Gene Model | MGI Sequence Detail 31543 C57BL/6J ±  kb
transcript ENSMUST00000094942 Ensembl | MGI Sequence Detail 1844 Not Applicable  
polypeptide ENSMUSP00000092548 Ensembl | MGI Sequence Detail 547 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 17
    cDNA 17

    Microarray probesets 6
Other
Accession IDs
less
MGI:1922301
References
more
  • Summaries
    All 26
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory