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Ccdc173 Gene Detail
Summary
  • Symbol
    Ccdc173
  • Name
    coiled-coil domain containing 173
  • Synonyms
    4930525K21Rik, 4930578N16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923100
    NCBI Gene: 75051
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:69758033-69789575 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 40.95 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    144 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923100
protein coding gene Chr2:69757392-69789617 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025804
protein coding gene Chr2:69742348-69778959 (-)
A/J MGP_AJ_G0025781
protein coding gene Chr2:67057983-67089927 (-)
AKR/J MGP_AKRJ_G0025750
protein coding gene Chr2:68866068-68901286 (-)
BALB/cJ MGP_BALBcJ_G0025776
protein coding gene Chr2:67219437-67253100 (-)
C3H/HeJ MGP_C3HHeJ_G0025536
protein coding gene Chr2:69104597-69139590 (-)
C57BL/6NJ MGP_C57BL6NJ_G0026223
protein coding gene Chr2:71861766-71894887 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023626
protein coding gene Chr2:64284820-64321488 (-)
CAST/EiJ MGP_CASTEiJ_G0025000
protein coding gene Chr2:69217494-69253331 (-)
CBA/J MGP_CBAJ_G0025516
protein coding gene Chr2:74505216-74546769 (-)
DBA/2J MGP_DBA2J_G0025647
protein coding gene Chr2:66690522-66722527 (-)
FVB/NJ MGP_FVBNJ_G0025610
protein coding gene Chr2:66071776-66103239 (-)
LP/J MGP_LPJ_G0025736
protein coding gene Chr2:69597859-69630433 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025639
protein coding gene Chr2:76567735-76609181 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0026280
protein coding gene Chr2:68965324-68996241 (-)
PWK/PhJ MGP_PWKPhJ_G0024741
protein coding gene Chr2:66531763-66565173 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024548
protein coding gene Chr2:69175096-69221800 (-)
WSB/EiJ MGP_WSBEiJ_G0025068
protein coding gene Chr2:69384915-69420578 (-)



Homology
more
  • Human Ortholog
    CCDC173, coiled-coil domain containing 173
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CCDC173, coiled-coil domain containing 173
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C2orf77
  • Links
    NCBI Gene ID: 129881
    neXtProt AC: NX_Q0VFZ6
    UniProt: Q0VFZ6

  • Chr Location
    2q31.1; chr2:169645425-169694421 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    12
  • Chemically induced (other)
    1
  • Gene trapped
    9
  • Targeted
    2
  • Genomic Mutations
    1 involving Ccdc173
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000070883 Ensembl Gene Model | MGI Sequence Detail 31543 C57BL/6J ±  kb
transcript ENSMUST00000094942 Ensembl | MGI Sequence Detail 1844 Not Applicable  
polypeptide ENSMUSP00000092548 Ensembl | MGI Sequence Detail 547 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 17
    cDNA 17

    Microarray probesets 6
Other
Accession IDs
less
MGI:1922301
References
more
  • Summaries
    All 26
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/10/2020
MGI 6.16
The Jackson Laboratory