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Rab11fip1
Gene Detail
Symbol

Name
ID
Rab11fip1
RAB11 family interacting protein 1 (class I)
MGI:1923017
Synonyms
2010200K21Rik, 4833414G05Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 8
15.91 cM, cytoband A3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr8:27138773-27174646 bp, - strand
From NCBI annotation of GRCm38

  35874 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:11853  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog

Gene Tree: Rab11fip1

Human
homologs
Human Homolog RAB11FIP1, RAB11 family interacting protein 1 (class I)
NCBI Gene ID 80223
neXtProt AC  NX_Q6WKZ4
Human Synonyms  NOEL1A, rab11-FIP1, RCP
Human Chr (Location)  8p11.22; chr8:37858947-37899497 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(8) : Gene trapped(5) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Rab11fip1 interacts with 413 markers (Mir1b, Mir7-1, Mir10a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process protein transport, regulated secretory pathway, ...
Component cytoplasm, cytoplasmic vesicle, ...
Function Rab GTPase binding
External Resources: FuncBase
Expression
cDNA source data(13)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(13) cDNA(13)
Microarray probesets(3)
Other database
links
Ensembl Gene ModelENSMUSG00000031488 (Evidence)
Entrez Gene75767 (Evidence)
Consensus CDS ProjectCCDS40311.1, CCDS52534.1
International Mouse Knockout Project StatusRab11fip1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 75767 NCBI Gene Model | MGI Sequence Detail 35874 C57BL/6J ±  kb
transcript NM_001080813 RefSeq | MGI Sequence Detail 7965 C57BL/6 
polypeptide Q9D620 UniProt | EBI | MGI Sequence Detail 645 Not Applicable 

For the selected sequences
All sequences(34) RefSeq(4) UniProt(5)
Polymorphisms
SNPs within 2kb(360 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000008 C2 calcium-dependent membrane targeting
InterPro IPR019018 Rab-binding domain FIP-RBD
Protein Ontology PR:000013581 rab11 family-interacting protein 1
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(28)
Other
accession IDs
MGI:1917512

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory