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Aftph
Gene Detail
 Symbol
Name
ID
Aftph
aftiphilin
MGI:1923012
Synonyms 9130023F12Rik
Feature Type protein coding gene
Genetic Map
Chromosome 11
13.25 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr11:20685084-20741589 bp, - strand
From VEGA annotation of GRCm38

  56506 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:9764  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Aftph

Human
homologs
Human Homolog AFTPH, aftiphilin
NCBI Gene ID 54812
neXtProt AC  NX_Q6ULP2
Human Synonyms  Nbla10388
Human Chr (Location)  2p14; chr2:64524305-64593005 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(8) : Gene trapped(5) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Aftph interacts with 401 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process protein transport, transport
Component AP-1 adaptor complex, cytoplasm, ...
Function clathrin binding
External Resources: FuncBase
Expression
cDNA source data(24)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(24) cDNA(24)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000005232 (Evidence)
Ensembl Gene ModelENSMUSG00000049659 (Evidence)
Entrez Gene216549 (Evidence)
DFCITC1574771, TC1592359, TC1607141, TC1610167, TC1630448
DoTSDT.101146096, DT.101384587, DT.101384588, DT.110518538, DT.533171, DT.91322268, DT.91580205
NIA Mouse Gene IndexU032557
Consensus CDS ProjectCCDS24459.1, CCDS56761.1, CCDS70146.1
International Mouse Knockout Project StatusAftph
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000005232 VEGA Gene Model | MGI Sequence Detail 56506 C57BL/6J ±  kb
transcript OTTMUST00000011669 VEGA | MGI Sequence Detail 3763 Not Applicable 
polypeptide OTTMUSP00000005417 VEGA | MGI Sequence Detail 931 Not Applicable 

For the selected sequences
All sequences(87) RefSeq(8) UniProt(7)
Polymorphisms SNPs within 2kb(189 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000003810 aftiphilin
References (Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(36)
Other
accession IDs
MGI:2144368, MGI:2144378, MGI:2144382, MGI:2144387, MGI:2144439

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory