About   Help   FAQ
Vwa5b1 Gene Detail
Summary
  • Symbol
    Vwa5b1
  • Name
    von Willebrand factor A domain containing 5B1
  • Synonyms
    4931403E03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922968
    NCBI Gene: 75718
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:138565360-138635884 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 70.43 cM, cytoband D3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    833 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922968
protein coding gene Chr4:138564229-138635938 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028999
protein coding gene Chr4:141326744-141406092 (-)
A/J MGP_AJ_G0028958
protein coding gene Chr4:135273071-135339737 (-)
AKR/J MGP_AKRJ_G0028910
protein coding gene Chr4:139141505-139209856 (-)
BALB/cJ MGP_BALBcJ_G0028982
protein coding gene Chr4:135950483-136017057 (-)
C3H/HeJ MGP_C3HHeJ_G0028696
protein coding gene Chr4:139508986-139585311 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029423
protein coding gene Chr4:146337198-146410435 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026694
protein coding gene Chr4:128248871-128320759 (-)
CAST/EiJ MGP_CASTEiJ_G0028128
protein coding gene Chr4:137670148-137745590 (-)
CBA/J MGP_CBAJ_G0028661
protein coding gene Chr4:150535262-150605475 (-)
DBA/2J MGP_DBA2J_G0028810
protein coding gene Chr4:135658355-135724477 (-)
FVB/NJ MGP_FVBNJ_G0028777
protein coding gene Chr4:134678480-134747712 (-)
LP/J MGP_LPJ_G0028909
protein coding gene Chr4:141411344-141486570 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028803
protein coding gene Chr4:154514719-154593867 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029461
protein coding gene Chr4:139665275-139735718 (-)
PWK/PhJ MGP_PWKPhJ_G0027849
protein coding gene Chr4:132501220-132574409 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027674
protein coding gene Chr4:135421037-135496460 (-)
WSB/EiJ MGP_WSBEiJ_G0028206
protein coding gene Chr4:139898233-139972579 (-)



Homology
more
  • Human Ortholog
    VWA5B1, von Willebrand factor A domain containing 5B1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    VWA5B1, von Willebrand factor A domain containing 5B1
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 127731
    neXtProt AC: NX_Q5TIE3
    UniProt: Q5TIE3

  • Chr Location
    1p36.12; chr1:20290907-20360442 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000028753 Ensembl Gene Model | MGI Sequence Detail 70525 C57BL/6J ±  kb
transcript ENSMUST00000030533 Ensembl | MGI Sequence Detail 7486 Not Applicable  
polypeptide ENSMUSP00000030533 Ensembl | MGI Sequence Detail 1215 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    Genomic 2
    cDNA 5

    Microarray probesets 1
References
more
  • Summaries
    All 23
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
10/08/2019
MGI 6.14
The Jackson Laboratory