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Vwa5b1 Gene Detail
Summary
  • Symbol
    Vwa5b1
  • Name
    von Willebrand factor A domain containing 5B1
  • Synonyms
    4931403E03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922968
    NCBI Gene: 75718
Location & Maps
more
  • Sequence Map
    Chr4:138565360-138635884 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      70525 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 70.43 cM, cytoband D3
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    VWA5B1, von Willebrand factor A domain containing 5B1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    VWA5B1, von Willebrand factor A domain containing 5B1
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 127731
    neXtProt AC: NX_Q5TIE3

  • Chr Location
    1p36.12; chr1:20290907-20360221 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Targeted
    2
  • Genomic Mutations
    3 involving Vwa5b1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000010001 VEGA Gene Model | MGI Sequence Detail 70525 C57BL/6J ±  kb
transcript OTTMUST00000023259 VEGA | MGI Sequence Detail 7486 Not Applicable  
polypeptide OTTMUSP00000010630 VEGA | MGI Sequence Detail 1215 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    833 from dbSNP Build 142
Protein
Information
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  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000029852 von Willebrand factor A domain-containing protein 5B1
  • InterPro Domains
    IPR013694 VIT domain
    IPR002035 von Willebrand factor, type A
Molecular
Reagents
less
  • All nucleic 6
    Genomic 1
    cDNA 5

    Microarray probesets 1
References
more
  • Summaries
    All 20
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/27/2016
MGI 6.05
The Jackson Laboratory