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Ssmem1 Gene Detail
Summary
  • Symbol
    Ssmem1
  • Name
    serine-rich single-pass membrane protein 1
  • Synonyms
    1700016K02Rik, 1700025E21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922897
    NCBI Gene: 75647
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:30509849-30520254 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 12.52 cM, cytoband A3.3
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    32 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922897
protein coding gene Chr6:30509846-30520254 (.)
129S1/SvImJ MGP_129S1SvImJ_G0030538
protein coding gene Chr6:28398856-28411459 (+)
A/J MGP_AJ_G0030511
protein coding gene Chr6:27178085-27188504 (+)
AKR/J MGP_AKRJ_G0030438
protein coding gene Chr6:28087901-28098288 (+)
BALB/cJ MGP_BALBcJ_G0030521
protein coding gene Chr6:27328573-27338968 (+)
C3H/HeJ MGP_C3HHeJ_G0030234
protein coding gene Chr6:28080703-28091095 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030975
protein coding gene Chr6:29204172-29214579 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028186
protein coding gene Chr6:25373992-25384309 (+)
CAST/EiJ MGP_CASTEiJ_G0029636
protein coding gene Chr6:27903118-27913496 (+)
CBA/J MGP_CBAJ_G0030212
protein coding gene Chr6:30316683-30327188 (+)
DBA/2J MGP_DBA2J_G0030356
protein coding gene Chr6:27106264-27116951 (+)
FVB/NJ MGP_FVBNJ_G0030310
protein coding gene Chr6:26873344-26883755 (+)
LP/J MGP_LPJ_G0030443
protein coding gene Chr6:28536276-28546679 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030346
protein coding gene Chr6:32757645-32768021 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031005
protein coding gene Chr6:27961139-27972542 (+)
PWK/PhJ MGP_PWKPhJ_G0029350
protein coding gene Chr6:26684124-26694881 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029186
protein coding gene Chr6:27704353-27714819 (+)
WSB/EiJ MGP_WSBEiJ_G0029712
protein coding gene Chr6:27930748-27941936 (+)



Homology
more
  • Human Ortholog
    SSMEM1, serine rich single-pass membrane protein 1
  • Vertebrate Orthologs
    7
  • Human Ortholog
    SSMEM1, serine rich single-pass membrane protein 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C7orf45
  • Links
    NCBI Gene ID: 136263
    neXtProt AC: NX_Q8WWF3
    UniProt: Q8WWF3

  • Chr Location
    7q32.2; chr7:130205399-130216869 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000029784 Ensembl Gene Model | MGI Sequence Detail 10406 C57BL/6J ±  kb
transcript ENSMUST00000031798 Ensembl | MGI Sequence Detail 1155 Not Applicable  
polypeptide ENSMUSP00000031798 Ensembl | MGI Sequence Detail 244 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR027955 Protein of unknown function DUF4636
Molecular
Reagents
less
  • All nucleic 16
    cDNA 16

    Microarray probesets 2
Other
Accession IDs
less
MGI:1916656
References
more
  • Summaries
    All 22
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory