About   Help   FAQ
Ssmem1 Gene Detail
Summary
  • Symbol
    Ssmem1
  • Name
    serine-rich single-pass membrane protein 1
  • Synonyms
    1700016K02Rik, 1700025E21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922897
    NCBI Gene: 75647
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:30509849-30520254 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 12.52 cM, cytoband A3.3
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    32 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922897
protein coding gene Chr6:30509791-30520254 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030538
protein coding gene Chr6:28398856-28411459 (+)
A/J MGP_AJ_G0030511
protein coding gene Chr6:27178085-27188504 (+)
AKR/J MGP_AKRJ_G0030438
protein coding gene Chr6:28087901-28098288 (+)
BALB/cJ MGP_BALBcJ_G0030521
protein coding gene Chr6:27328573-27338968 (+)
C3H/HeJ MGP_C3HHeJ_G0030234
protein coding gene Chr6:28080703-28091095 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030975
protein coding gene Chr6:29204172-29214579 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028186
protein coding gene Chr6:25373992-25384309 (+)
CAST/EiJ MGP_CASTEiJ_G0029636
protein coding gene Chr6:27903118-27913496 (+)
CBA/J MGP_CBAJ_G0030212
protein coding gene Chr6:30316683-30327188 (+)
DBA/2J MGP_DBA2J_G0030356
protein coding gene Chr6:27106264-27116951 (+)
FVB/NJ MGP_FVBNJ_G0030310
protein coding gene Chr6:26873344-26883755 (+)
LP/J MGP_LPJ_G0030443
protein coding gene Chr6:28536276-28546679 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030346
protein coding gene Chr6:32757645-32768021 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031005
protein coding gene Chr6:27961139-27972542 (+)
PWK/PhJ MGP_PWKPhJ_G0029350
protein coding gene Chr6:26684124-26694881 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029186
protein coding gene Chr6:27704353-27714819 (+)
WSB/EiJ MGP_WSBEiJ_G0029712
protein coding gene Chr6:27930748-27941936 (+)



Homology
more
  • Human Ortholog
    SSMEM1, serine rich single-pass membrane protein 1
  • Vertebrate Orthologs
    7
  • Human Ortholog
    SSMEM1, serine rich single-pass membrane protein 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C7orf45
  • Links
    NCBI Gene ID: 136263
    neXtProt AC: NX_Q8WWF3
    UniProt: Q8WWF3

  • Chr Location
    7q32.2; chr7:130205399-130216869 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000029784 Ensembl Gene Model | MGI Sequence Detail 10406 C57BL/6J ±  kb
transcript ENSMUST00000031798 Ensembl | MGI Sequence Detail 1155 Not Applicable  
polypeptide ENSMUSP00000031798 Ensembl | MGI Sequence Detail 244 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR027955 Protein of unknown function DUF4636
Molecular
Reagents
less
  • All nucleic 16
    cDNA 16

    Microarray probesets 2
Other
Accession IDs
less
MGI:1916656
References
more
  • Summaries
    All 22
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
09/22/2020
MGI 6.16
The Jackson Laboratory