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Spata25 Gene Detail
Summary
  • Symbol
    Spata25
  • Name
    spermatogenesis associated 25
  • Synonyms
    1700020C07Rik, TSG23
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922892
    NCBI Gene: 75642
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:164827382-164828534 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 85.27 cM, cytoband H3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    15 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922892
protein coding gene Chr2:164826389-164828537 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026877
protein coding gene Chr2:170329034-170331182 (-)
A/J MGP_AJ_G0026844
protein coding gene Chr2:163365343-163367491 (-)
AKR/J MGP_AKRJ_G0026815
protein coding gene Chr2:168240423-168242571 (-)
BALB/cJ MGP_BALBcJ_G0026853
protein coding gene Chr2:163726671-163728819 (-)
C3H/HeJ MGP_C3HHeJ_G0026595
protein coding gene Chr2:168586295-168588443 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027300
protein coding gene Chr2:175261772-175263920 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024671
protein coding gene Chr2:156772289-156774474 (-)
CAST/EiJ MGP_CASTEiJ_G0026053
protein coding gene Chr2:169001267-169003415 (-)
CBA/J MGP_CBAJ_G0026572
protein coding gene Chr2:181624773-181626921 (-)
DBA/2J MGP_DBA2J_G0026710
protein coding gene Chr2:162532355-162534503 (-)
FVB/NJ MGP_FVBNJ_G0026676
protein coding gene Chr2:160951875-160954023 (-)
LP/J MGP_LPJ_G0026812
protein coding gene Chr2:170389059-170391207 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026695
protein coding gene Chr2:185185199-185187347 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027357
protein coding gene Chr2:168127706-168129854 (-)
PWK/PhJ MGP_PWKPhJ_G0025790
protein coding gene Chr2:162133291-162135439 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025591
protein coding gene Chr2:167026517-167028663 (-)
WSB/EiJ MGP_WSBEiJ_G0026126
protein coding gene Chr2:169007192-169009340 (-)



Homology
more
  • Human Ortholog
    SPATA25, spermatogenesis associated 25
  • Vertebrate Orthologs
    7
  • Human Ortholog
    SPATA25, spermatogenesis associated 25
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C20orf165, dJ337O18.8, TSG23
  • Links
    NCBI Gene ID: 128497
    neXtProt AC: NX_Q9BR10
    UniProt: Q9BR10

  • Chr Location
    20q13.12; chr20:45886491-45887599 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 75642 NCBI Gene Model | MGI Sequence Detail 1153 C57BL/6J ±  kb
transcript NM_029370 RefSeq | MGI Sequence Detail 783 C57BL/6  
polypeptide Q9DA57 UniProt | EBI | MGI Sequence Detail 226 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 2
References
more
  • Summaries
    All 27
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:234235 Miyata H, et al., Genome engineering uncovers 54 evolutionarily conserved and testis-enriched genes that are not required for male fertility in mice. Proc Natl Acad Sci U S A. 2016 Jul 12;113(28):7704-10

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory