About   Help   FAQ
Kxd1 Gene Detail
Summary
  • Symbol
    Kxd1
  • Name
    KxDL motif containing 1
  • Synonyms
    0610030B01Rik, 2810422J05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922870
    NCBI Gene: 75620
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:70513396-70523180 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 34.15 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    25 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922870
protein coding gene Chr8:70508272-70527956 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033710
protein coding gene Chr8:70776753-70800211 (-)
A/J MGP_AJ_G0033693
protein coding gene Chr8:67905914-67926247 (-)
AKR/J MGP_AKRJ_G0033618
protein coding gene Chr8:69837161-69857851 (-)
BALB/cJ MGP_BALBcJ_G0033689
protein coding gene Chr8:68122960-68160385 (-)
C3H/HeJ MGP_C3HHeJ_G0033399
protein coding gene Chr8:70479921-70504952 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034206
protein coding gene Chr8:73456188-73477856 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031150
protein coding gene Chr8:62720556-62741355 (-)
CAST/EiJ MGP_CASTEiJ_G0032724
protein coding gene Chr8:69966638-69987644 (-)
CBA/J MGP_CBAJ_G0033377
protein coding gene Chr8:76086999-76115357 (-)
DBA/2J MGP_DBA2J_G0033531
protein coding gene Chr8:67623234-67642613 (-)
FVB/NJ MGP_FVBNJ_G0033472
protein coding gene Chr8:66738514-66761699 (-)
LP/J MGP_LPJ_G0033618
protein coding gene Chr8:70804924-70825803 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033515
protein coding gene Chr8:78763999-78783423 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034224
protein coding gene Chr8:70022195-70042459 (-)
PWK/PhJ MGP_PWKPhJ_G0032432
protein coding gene Chr8:66921223-66942316 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032268
protein coding gene Chr8:68986490-69009331 (-)
WSB/EiJ MGP_WSBEiJ_G0032839
protein coding gene Chr8:70383259-70404728 (-)



Homology
more
  • Human Ortholog
    KXD1, KxDL motif containing 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    KXD1, KxDL motif containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    BORCS4, C10orf50, C19orf50, KXDL, MST096, MSTP096
  • Links
    NCBI Gene ID: 79036
    neXtProt AC: NX_Q9BQD3
    UniProt: Q9BQD3

  • Chr Location
    19p13.11; chr19:18557762-18569387 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 11447
    1 human;1 mouse;1 rat;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: KXD1
  • Gene Tree
Human Diseases
more
  • Diseases
    1 with Kxd1 mouse models

Human Disease Mouse Models
      
IDs
View 1 model
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    1 with disease annotations
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit reduced melanosomes in the choroid and retinal pigment epithelium and decreased platelet dense granule number.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 75620 NCBI Gene Model | MGI Sequence Detail 9785 C57BL/6J ±  kb
transcript NM_029366 RefSeq | MGI Sequence Detail 1236 C57BL/6  
polypeptide Q80XH1 UniProt | EBI | MGI Sequence Detail 177 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 65
    cDNA 65

    Microarray probesets 3
Other
Accession IDs
less
MGI:1915631, MGI:2142851
References
more
  • Summaries
    All 31
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 5
    Phenotypes 8
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:238623 Zhou W, et al., BLOS2 negatively regulates Notch signaling during neural and hematopoietic stem and progenitor cell development. Elife. 2016 Oct 10;5

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
03/13/2019
MGI 6.13
The Jackson Laboratory