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Smim15 Gene Detail
Summary
  • Symbol
    Smim15
  • Name
    small integral membrane protein 15
  • Synonyms
    2810008M24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922866
    NCBI Gene: 75616
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:108044474-108049175 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 59.63 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    38 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922866
protein coding gene Chr13:108044446-108049175 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020922
protein coding gene Chr13:110329122-110333876 (+)
A/J MGP_AJ_G0029497
protein coding gene Chr5:41444169-41445992 (-)
AKR/J MGP_AKRJ_G0020847
protein coding gene Chr13:109204287-109207132 (+)
BALB/cJ MGP_BALBcJ_G0020872
protein coding gene Chr13:106710344-106714507 (+)
C3H/HeJ MGP_C3HHeJ_G0020661
protein coding gene Chr13:108981559-108984339 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021307
protein coding gene Chr13:113647271-113649986 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018876
protein coding gene Chr13:101417754-101420485 (+)
CAST/EiJ MGP_CASTEiJ_G0020180
protein coding gene Chr13:108503776-108506491 (+)
CBA/J MGP_CBAJ_G0020623
protein coding gene Chr13:118027408-118033423 (+)
DBA/2J MGP_DBA2J_G0029344
protein coding gene Chr5:41531374-41533281 (-)
FVB/NJ MGP_FVBNJ_G0020729
protein coding gene Chr13:104403158-104406658 (+)
LP/J MGP_LPJ_G0020821
protein coding gene Chr13:110397840-110402053 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020757
protein coding gene Chr13:118438830-118441653 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0021345
protein coding gene Chr13:108662168-108664807 (+)
PWK/PhJ MGP_PWKPhJ_G0019933
protein coding gene Chr13:104438478-104441274 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019755
protein coding gene Chr13:104935270-104937977 (+)
WSB/EiJ MGP_WSBEiJ_G0020238
protein coding gene Chr13:109209505-109212217 (+)



Homology
more
  • Human Ortholog
    SMIM15, small integral membrane protein 15
  • Vertebrate Orthologs
    9
  • Human Ortholog
    SMIM15, small integral membrane protein 15
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C5orf43
  • Links
    NCBI Gene ID: 643155
    neXtProt AC: NX_Q7Z3B0
    UniProt: Q7Z3B0

  • Chr Location
    5q12.1; chr5:61157709-61162475 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 75616 NCBI Gene Model | MGI Sequence Detail 4702 C57BL/6J ±  kb
transcript NM_001048250 RefSeq | MGI Sequence Detail 1864 C57BL/6  
polypeptide Q3UTD9 UniProt | EBI | MGI Sequence Detail 74 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR027877 Small integral membrane protein 15
Molecular
Reagents
less
  • All nucleic 78
    cDNA 78

    Microarray probesets 3
References
more
  • Summaries
    All 22
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory