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Smim15 Gene Detail
Summary
  • Symbol
    Smim15
  • Name
    small integral membrane protein 15
  • Synonyms
    2810008M24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922866
    NCBI Gene: 75616
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:108181008-108185680 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 59.63 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    25 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922866
protein coding gene Chr13:108180980-108185706 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020922
protein coding gene Chr13:110329122-110333876 (+)
A/J MGP_AJ_G0029497
protein coding gene Chr5:41444169-41445992 (-)
AKR/J MGP_AKRJ_G0020847
protein coding gene Chr13:109204287-109207132 (+)
BALB/cJ MGP_BALBcJ_G0020872
protein coding gene Chr13:106710344-106714507 (+)
C3H/HeJ MGP_C3HHeJ_G0020661
protein coding gene Chr13:108981559-108984339 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021307
protein coding gene Chr13:113647271-113649986 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018876
protein coding gene Chr13:101417754-101420485 (+)
CAST/EiJ MGP_CASTEiJ_G0020180
protein coding gene Chr13:108503776-108506491 (+)
CBA/J MGP_CBAJ_G0020623
protein coding gene Chr13:118027408-118033423 (+)
DBA/2J MGP_DBA2J_G0029344
protein coding gene Chr5:41531374-41533281 (-)
FVB/NJ MGP_FVBNJ_G0020729
protein coding gene Chr13:104403158-104406658 (+)
LP/J MGP_LPJ_G0020821
protein coding gene Chr13:110397840-110402053 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020757
protein coding gene Chr13:118438830-118441653 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0021345
protein coding gene Chr13:108662168-108664807 (+)
PWK/PhJ MGP_PWKPhJ_G0019933
protein coding gene Chr13:104438478-104441274 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019755
protein coding gene Chr13:104935270-104937977 (+)
WSB/EiJ MGP_WSBEiJ_G0020238
protein coding gene Chr13:109209505-109212217 (+)



Homology
more
  • Human Ortholog
    SMIM15, small integral membrane protein 15
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SMIM15, small integral membrane protein 15
  • Synonyms
    C5orf43
  • Links
    NCBI Gene ID: 643155
    neXtProt AC: NX_Q7Z3B0
    UniProt: Q7Z3B0

  • Chr Location
    5q12.1; chr5:61157709-61162475 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 75616 NCBI Gene Model | MGI Sequence Detail 4673 C57BL/6J ±  kb
transcript NM_001048250 RefSeq | MGI Sequence Detail 1864 C57BL/6  
polypeptide Q3UTD9 UniProt | EBI | MGI Sequence Detail 74 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR027877 Small integral membrane protein 15
Molecular
Reagents
less
  • All nucleic 78
    cDNA 78

    Microarray probesets 3
References
more
  • Summaries
    All 22
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/05/2021
MGI 6.17
The Jackson Laboratory