Rab26os Gene Detail

Summary

• Symbol
  Rab26os
• Name
  RAB26, member RAS oncogene family, opposite strand
• Synonyms
  2610019E17Rik

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:1922864
  NCBI Gene: 75614
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:24747225-24747718 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 12.40 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  25 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1922864	antisense lncRNA gene	Chr17:24747205-24747723 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003376	antisense lncRNA gene	Chr17:23519719-23520219 (+)
A/J	MGP_AJ_G0003352	antisense lncRNA gene	Chr17:22885339-22885839 (+)
AKR/J	MGP_AKRJ_G0003335	antisense lncRNA gene	Chr17:22961956-22962454 (+)
BALB/cJ	MGP_BALBcJ_G0003341	antisense lncRNA gene	Chr17:23071649-23072148 (+)
C3H/HeJ	MGP_C3HHeJ_G0003294	antisense lncRNA gene	Chr17:23319300-23319799 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003482	antisense lncRNA gene	Chr17:24570843-24571339 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002999	antisense lncRNA gene	Chr17:20350426-20350889 (+)
CAST/EiJ	MGP_CASTEiJ_G0003257	antisense lncRNA gene	Chr17:23158780-23159280 (+)
CBA/J	MGP_CBAJ_G0003290	antisense lncRNA gene	Chr17:25408046-25408545 (+)
DBA/2J	MGP_DBA2J_G0003296	antisense lncRNA gene	Chr17:22474171-22474671 (+)
FVB/NJ	MGP_FVBNJ_G0003314	antisense lncRNA gene	Chr17:22193131-22193631 (+)
LP/J	MGP_LPJ_G0003369	antisense lncRNA gene	Chr17:23830932-23831432 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003303	antisense lncRNA gene	Chr17:25122573-25123073 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003485	antisense lncRNA gene	Chr17:23239165-23239665 (+)
PWK/PhJ	MGP_PWKPhJ_G0003217	antisense lncRNA gene	Chr17:21223347-21223843 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003161	antisense lncRNA gene	Chr17:21275222-21275722 (+)
WSB/EiJ	MGP_WSBEiJ_G0003291	antisense lncRNA gene	Chr17:23307032-23307531 (+)

Homology

• Gene Tree
  Rab26os
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype from 1 allele in 1 genetic background
  7 phenotype references
  

• All Mutations and Alleles
  92
• Endonuclease-mediated
  1
• Gene trapped
  91
• Find Mice (IMSR)
  0 strains or lines available

Mice homozygous for a null allele are viable with no obvious defects.

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  6

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000093565 (Evidence)
• NCBI Gene
  75614

Representative Sequences			Length	Strain/Species
genomic	75614	NCBI Gene Model | MGI Sequence Detail	494	C57BL/6J
transcript	NR_045289	RefSeq | MGI Sequence Detail	295	C57BL/6

Molecular
Reagents

• All nucleic 6

  cDNA 6

  
  

  Microarray probesets 1

References

• Summaries
  All 18

  Phenotypes 7
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:330639 Han X, et al., Mouse knockout models reveal largely dispensable but context-dependent functions of lncRNAs during development. J Mol Cell Biol. 2018 Apr 1;10(2):175-178

TSS for Rab26os:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr143043	Chr17:24747217-24747238 (+)	3 bp