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Trir Gene Detail
Summary
  • Symbol
    Trir
  • Name
    telomerase RNA component interacting RNase
  • Synonyms
    1110002H14Rik, 2310036O22Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922833
    NCBI Gene: 68544
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr8:85026823-85030286 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      3464 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 41.49 cM, cytoband C3
  • Mapping Data
    4 experiments
Homology
more
  • Human Ortholog
    TRIR, telomerase RNA component interacting RNase
  • Vertebrate Orthologs
    8
  • Human Ortholog
    TRIR, telomerase RNA component interacting RNase
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C19orf43, fSAP18, TERCIR
  • Links
    NCBI Gene ID: 79002
    neXtProt AC: NX_Q9BQ61
    UniProt: Q9BQ61

  • Chr Location
    19p13.13; chr19:12730640-12734715 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    29 phenotype references
  • All Mutations and Alleles
    10
  • Chemically induced (other)
    1
  • Gene trapped
    8
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Trir
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000061401 VEGA Gene Model | MGI Sequence Detail 3464 C57BL/6J ±  kb
transcript OTTMUST00000149830 VEGA | MGI Sequence Detail 902 Not Applicable  
polypeptide OTTMUSP00000077706 VEGA | MGI Sequence Detail 173 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    45 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 100
    cDNA 100

    Microarray probesets 4
Other
Accession IDs
less
MGI:1915794, MGI:2142644
References
more
  • Summaries
    All 55
    Gene Ontology 3
    Phenotypes 29
  • Earliest
    J:13049 Gruneberg H, Genetical studies on the skeleton of the mouse. XVIII. Three genes for syndactylism. J Genet. 1956;54:113-145
  • Latest
    J:221960 Raike RS, et al., Dystonia and cerebellar degeneration in the leaner mouse mutant. Brain Res. 2015 Jun 22;1611:56-64

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/11/2018
MGI 6.12
The Jackson Laboratory