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Spata9 Gene Detail
Summary
  • Symbol
    Spata9
  • Name
    spermatogenesis associated 9
  • Synonyms
    1700030K01Rik, 4930599C08Rik, A930023H06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922821
    NCBI Gene: 75571
Location & Maps
more
  • Sequence Map
    Chr13:75967739-75998968 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      31230 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 40.95 cM, cytoband C1
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SPATA9, spermatogenesis associated 9
  • Vertebrate Orthologs
    7
  • Human Ortholog
    SPATA9, spermatogenesis associated 9
    Orthology source: HomoloGene
  • Synonyms
    NYD-SP16
  • Links
    NCBI Gene ID: 83890
    neXtProt AC: NX_Q9BWV2

  • Chr Location
    5q15; chr5:95652181-95683010 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Targeted
    3
  • Genomic Mutations
    1 involving Spata9
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000021590 Ensembl Gene Model | MGI Sequence Detail 31230 C57BL/6J ±  kb
transcript ENSMUST00000022081 Ensembl | MGI Sequence Detail 1053 Not Applicable  
polypeptide ENSMUSP00000022081 Ensembl | MGI Sequence Detail 252 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    510 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000015497 spermatogenesis-associated protein 9
  • InterPro Domains
    IPR031659 Spermatogenesis-associated protein 9
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 3
Other
Accession IDs
less
MGI:1922632, MGI:1925205
References
more
  • Summaries
    All 19
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/22/2016
MGI 6.04
The Jackson Laboratory