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Rsph9
Gene Detail
Symbol

Name
ID
Rsph9
radial spoke head 9 homolog (Chlamydomonas)
MGI:1922814
Synonyms
1700027N10Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 17
22.87 cM, cytoband C
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr17:46122035-46144216 bp, - strand
From VEGA annotation of GRCm38

  22182 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:12606  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 cattle; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Rsph9

Human
homologs
Human Homolog RSPH9, radial spoke head 9 homolog (Chlamydomonas)
NCBI Gene ID 221421
neXtProt AC  NX_Q9H1X1
Human Synonyms  C6orf206, CILD12, MRPS18AL1
Human Chr (Location)  6p21.1; chr6:43644557-43671198 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human RSPH9
Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Rsph9 interacts with 19 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process axoneme assembly, cilium movement
Component axoneme, cell projection, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (32)    Tissues (2)    Images (19)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 32
cDNA source data(18)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(18) cDNA(18)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000028346 (Evidence)
Ensembl Gene ModelENSMUSG00000023966 (Evidence)
Entrez Gene75564 (Evidence)
UniGene17993
DFCITC1582544
DoTSDT.40185826, DT.55169745
NIA Mouse Gene IndexU037846
Consensus CDS ProjectCCDS28820.1
International Mouse Knockout Project StatusRsph9
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000028346 VEGA Gene Model | MGI Sequence Detail 22182 C57BL/6J ±  kb
transcript OTTMUST00000070265 VEGA | MGI Sequence Detail 966 Not Applicable 
polypeptide OTTMUSP00000035777 VEGA | MGI Sequence Detail 276 Not Applicable 

For the selected sequences
All sequences(33) RefSeq(6) UniProt(3)
Polymorphisms
SNPs within 2kb(68 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR006802 Radial spokehead-like protein
Protein Ontology PR:000014329 radial spoke head protein 9
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:193822 Lumayag S, et al., Inactivation of the microRNA-183/96/182 cluster results in syndromic retinal degeneration. Proc Natl Acad Sci U S A. 2013 Feb 5;110(6):E507-16
All references(34)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory