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Spata45 Gene Detail
Summary
  • Symbol
    Spata45
  • Name
    spermatogenesis associated 45
  • Synonyms
    1700022P22Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922808
    NCBI Gene: 75558
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:191036639-191042942 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 96.28 cM, cytoband H6
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    89 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922808
protein coding gene Chr1:191035709-191042942 (+)
129S1/SvImJ MGP_129S1SvImJ_G0016936
protein coding gene Chr1:198058035-198064998 (+)
A/J MGP_AJ_G0016915
protein coding gene Chr1:189942020-189948048 (+)
AKR/J MGP_AKRJ_G0016880
protein coding gene Chr1:195560364-195566177 (+)
BALB/cJ MGP_BALBcJ_G0016873
protein coding gene Chr1:190614214-190620960 (+)
C3H/HeJ MGP_C3HHeJ_G0016697
protein coding gene Chr1:196408290-196414221 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017336
protein coding gene Chr1:204364250-204372244 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015043
protein coding gene Chr1:180840938-180846776 (+)
CAST/EiJ MGP_CASTEiJ_G0016280
protein coding gene Chr1:195997325-196003589 (+)
CBA/J MGP_CBAJ_G0016671
protein coding gene Chr1:211931317-211937415 (+)
DBA/2J MGP_DBA2J_G0016777
protein coding gene Chr1:188662169-188668286 (+)
FVB/NJ MGP_FVBNJ_G0016773
protein coding gene Chr1:186787404-186793553 (+)
LP/J MGP_LPJ_G0016852
protein coding gene Chr1:199228319-199234120 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016805
protein coding gene Chr1:218639598-218647073 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017373
protein coding gene Chr1:195446687-195453936 (+)
PWK/PhJ MGP_PWKPhJ_G0016067
protein coding gene Chr1:187942072-187948279 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015843
protein coding gene Chr1:194446544-194452342 (+)
WSB/EiJ MGP_WSBEiJ_G0016342
protein coding gene Chr1:195662046-195669887 (+)



Homology
more
  • Human Ortholog
    SPATA45, spermatogenesis associated 45
  • Vertebrate Orthologs
    8
  • Human Ortholog
    SPATA45, spermatogenesis associated 45
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C1orf227
  • Links
    NCBI Gene ID: 149643
    neXtProt AC: NX_Q537H7
    UniProt: Q537H7

  • Chr Location
    1q32.3; chr1:212830141-212847649 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000057072 Ensembl Gene Model | MGI Sequence Detail 6304 C57BL/6J ±  kb
transcript ENSMUST00000192151 Ensembl | MGI Sequence Detail 443 Not Applicable  
polypeptide ENSMUSP00000141721 Ensembl | MGI Sequence Detail 97 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR038806 Spermatogenesis-associated protein 45
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 5
References
more
  • Summaries
    All 16
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory