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Paqr9
Gene Detail
Symbol

Name
ID
Paqr9
progestin and adipoQ receptor family member IX
MGI:1922802
Synonyms
1700020G04Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 9
50.15 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr9:95559657-95568023 bp, + strand
From VEGA annotation of GRCm38

  8367 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:18882  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: PAQR9
Protein SuperFamily: membrane receptor, ADIPOR type
Gene Tree: Paqr9

Human
homologs
PAQR9, progestin and adipoQ receptor family member IX
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 344838
neXtProt AC: NX_Q6ZVX9

Human Chr (Location): 3q23; chr3:142961231-142963336 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Paqr9 interacts with 218 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process biological_process
Component integral component of membrane, membrane
Function receptor activity
External Resources: FuncBase
Expression
Literature Summary: (4 records)
Data Summary: Results (45)    Tissues (7)    Images (22)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 45
cDNA source data(35)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase paqr9    NEW 
Molecular
reagents
All nucleic(35) cDNA(35)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000022621 (Evidence)
Ensembl Gene Model ENSMUSG00000064225 (Evidence)
Entrez Gene 75552 (Evidence)
UniGene 151485
DFCI TC1580607
DoTS DT.55134275, DT.55142573
NIA Mouse Gene Index U010863
Consensus CDS Project CCDS23409.1
International Mouse Phenotyping Consortium Status Paqr9
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022621 VEGA Gene Model | MGI Sequence Detail 8367 C57BL/6J ±  kb
transcript OTTMUST00000054191 VEGA | MGI Sequence Detail 8367 Not Applicable 
polypeptide OTTMUSP00000025827 VEGA | MGI Sequence Detail 375 Not Applicable 

For the selected sequences
All sequences(20) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(82 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR004254 Hly-III-related
Protein Ontology PR:000030542 progestin and adipoQ receptor family member 9
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:171050 Thiagarajan RD, et al., Identification of anchor genes during kidney development defines ontological relationships, molecular subcompartments and regulatory pathways. PLoS One. 2011;6(2):e17286
All references(29)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory