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1700025H01Rik Gene Detail
Summary
  • Symbol
    1700025H01Rik
  • Name
    RIKEN cDNA 1700025H01 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1922781
    NCBI Gene: 75531
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr16:30195071-30200299 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 21.18 cM, cytoband B2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    42 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922781
lncRNA gene Chr16:30195071-30200299 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005655
lincRNA gene Chr16:28074489-28079713 (+)
A/J MGP_AJ_G0005642
lincRNA gene Chr16:26785388-26792317 (+)
AKR/J MGP_AKRJ_G0005621
lincRNA gene Chr16:27799803-27805797 (+)
BALB/cJ MGP_BALBcJ_G0005622
lincRNA gene Chr16:26966158-26971382 (+)
C3H/HeJ MGP_C3HHeJ_G0005569
lincRNA gene Chr16:27906250-27911357 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005780
lincRNA gene Chr16:28686962-28693369 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0005513
lincRNA gene Chr16:27992369-27998794 (+)
CBA/J MGP_CBAJ_G0005559
lincRNA gene Chr16:29894640-29899778 (+)
DBA/2J MGP_DBA2J_G0005574
lincRNA gene Chr16:26669244-26674437 (+)
FVB/NJ MGP_FVBNJ_G0005601
lincRNA gene Chr16:26636274-26640638 (+)
LP/J MGP_LPJ_G0005658
lincRNA gene Chr16:27891114-27896245 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005586
lincRNA gene Chr16:29429108-29434344 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005780
lincRNA gene Chr16:27765552-27772309 (+)
PWK/PhJ MGP_PWKPhJ_G0005460
lincRNA gene Chr16:26965436-26970632 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005379
lincRNA gene Chr16:27522613-27527883 (+)
WSB/EiJ MGP_WSBEiJ_G0005563
lincRNA gene Chr16:27710871-27716077 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000101888 Ensembl Gene Model | MGI Sequence Detail 5229 C57BL/6J ±  kb
transcript ENSMUST00000187479 Ensembl | MGI Sequence Detail 547 Not Applicable  
polypeptide Q9D9Y6 UniProt | EBI | MGI Sequence Detail 121 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 11
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory