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Lyrm7 Gene Detail
Summary
  • Symbol
    Lyrm7
  • Name
    LYR motif containing 7
  • Synonyms
    1700024C24Rik, 9330147L21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922780
    NCBI Gene: 75530
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:54826866-54860916 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 32.13 cM, cytoband B1.3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    233 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922780
protein coding gene Chr11:54826866-54861071 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018319
protein coding gene Chr11:54313862-54348590 (-)
A/J MGP_AJ_G0018288
protein coding gene Chr11:52289640-52323480 (-)
AKR/J MGP_AKRJ_G0018257
protein coding gene Chr11:53999424-54042817 (-)
BALB/cJ MGP_BALBcJ_G0018259
protein coding gene Chr11:52636943-52669302 (-)
C3H/HeJ MGP_C3HHeJ_G0018070
protein coding gene Chr11:53940755-53975017 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018711
protein coding gene Chr11:55974704-56010094 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016361
protein coding gene Chr11:49732216-49759999 (-)
CAST/EiJ MGP_CASTEiJ_G0017635
protein coding gene Chr11:53998632-54020032 (-)
CBA/J MGP_CBAJ_G0018045
protein coding gene Chr11:58621645-58664900 (-)
DBA/2J MGP_DBA2J_G0018154
protein coding gene Chr11:51999373-52030407 (-)
FVB/NJ MGP_FVBNJ_G0018146
protein coding gene Chr11:51653264-51685787 (-)
LP/J MGP_LPJ_G0018229
protein coding gene Chr11:54766010-54803130 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018172
protein coding gene Chr11:59836597-59880255 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018753
protein coding gene Chr11:54015469-54052431 (-)
PWK/PhJ MGP_PWKPhJ_G0017408
protein coding gene Chr11:52542703-52574455 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017203
protein coding gene Chr11:53813623-53846011 (-)
WSB/EiJ MGP_WSBEiJ_G0017683
protein coding gene Chr11:53652815-53689258 (-)



Homology
more
  • Human Ortholog
    LYRM7, LYR motif containing 7
  • Vertebrate Orthologs
    10
  • Human Ortholog
    LYRM7, LYR motif containing 7
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C5orf31, MC3DN8, MZM1L
  • Links
    NCBI Gene ID: 90624
    neXtProt AC: NX_Q5U5X0
    UniProt: Q5U5X0

  • Chr Location
    5q23.3-q31.1; chr5:131170914-131205426 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 18762
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: LYRM7
  • Gene Tree
Human Diseases
more
  • Diseases
    1 with human LYRM7 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000020268 Ensembl Gene Model | MGI Sequence Detail 34051 C57BL/6J ±  kb
transcript ENSMUST00000148070 Ensembl | MGI Sequence Detail 1501 Not Applicable  
polypeptide ENSMUSP00000118373 Ensembl | MGI Sequence Detail 104 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 2
Other
Accession IDs
less
MGI:1924816
References
more
  • Summaries
    All 28
    Gene Ontology 2
    Phenotypes 8
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory