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Tex48 Gene Detail
Summary
  • Symbol
    Tex48
  • Name
    testis expressed 48
  • Synonyms
    1700018C11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922774
    NCBI Gene: 75524
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:63607089-63622428 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 34.03 cM, cytoband C1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    113 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922774
protein coding gene Chr4:63607085-63622450 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028371
protein coding gene Chr4:62627086-62643051 (-)
A/J MGP_AJ_G0028332
protein coding gene Chr4:60383891-60398842 (-)
AKR/J MGP_AKRJ_G0028281
protein coding gene Chr4:62021095-62036109 (-)
BALB/cJ MGP_BALBcJ_G0028352
protein coding gene Chr4:60562250-60577866 (-)
C3H/HeJ MGP_C3HHeJ_G0028067
protein coding gene Chr4:62542002-62557317 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028792
protein coding gene Chr4:64771945-64789185 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026095
protein coding gene Chr4:57724783-57739891 (-)
CAST/EiJ MGP_CASTEiJ_G0027506
protein coding gene Chr4:60539550-60554731 (-)
CBA/J MGP_CBAJ_G0028036
protein coding gene Chr4:67044517-67064372 (-)
DBA/2J MGP_DBA2J_G0028185
protein coding gene Chr4:60221522-60237540 (-)
FVB/NJ MGP_FVBNJ_G0028151
protein coding gene Chr4:59506116-59521216 (-)
LP/J MGP_LPJ_G0028284
protein coding gene Chr4:62922765-62938026 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028180
protein coding gene Chr4:70141452-70160106 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028828
protein coding gene Chr4:62129614-62147741 (-)
PWK/PhJ MGP_PWKPhJ_G0027235
protein coding gene Chr4:58772269-58789425 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027061
protein coding gene Chr4:59615219-59630130 (-)
WSB/EiJ MGP_WSBEiJ_G0027585
protein coding gene Chr4:62162891-62179735 (-)



Homology
more
  • Human Ortholog
    TEX48, testis expressed 48
  • Vertebrate Orthologs
    5
  • Human Ortholog
    TEX48, testis expressed 48
    Orthology source: HomoloGene
  • Links
    NCBI Gene ID: 100505478
    neXtProt AC: NX_A0A1B0GUV7
    UniProt: A0A1B0GUV7

  • Chr Location
    chr9:114666434-114682089 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000058935 Ensembl Gene Model | MGI Sequence Detail 15340 C57BL/6J ±  kb
transcript ENSMUST00000102861 Ensembl | MGI Sequence Detail 677 Not Applicable  
polypeptide ENSMUSP00000099925 Ensembl | MGI Sequence Detail 110 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 2
References
more
  • Summaries
    All 20
    Developmental Gene Expression 1
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory