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Cfap126
Gene Detail
Symbol

Name
ID
Cfap126
cilia and flagella associated protein 126
MGI:1922722
Synonyms
1700009P17Rik, Flattop, Fltp
Feature Type
protein coding gene
Genetic Map
Chromosome 1
78.96 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr1:171113918-171126967 bp, + strand
From VEGA annotation of GRCm38

  13050 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:23682  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: Cfap126

Human
homologs
Human Homolog CFAP126, cilia and flagella associated protein 126
NCBI Gene ID 257177
neXtProt AC  NX_Q5VTH2
Human Synonyms  C1orf192, Flattop, Fltp
Human Chr (Location)  1q23.3; chr1:161364731-161367883 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(16) : Gene trapped(14) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for a knock-in allele are viable and fertile.
 
Interactions
Cfap126 interacts with 35 markers (Mir33, Mir204, Mir211, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (73)    Tissues (26)    Images (22)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 55
In situ reporter (knock in) 2
Western blot 1
RT-PCR 15
cDNA source data(16)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(17) cDNA(16) Primer pair(1)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000021658 (Evidence)
Ensembl Gene ModelENSMUSG00000026649 (Evidence)
Entrez Gene75472 (Evidence)
UniGene32760
DFCITC1585975
DoTSDT.50315308
NIA Mouse Gene IndexU001077
Consensus CDS ProjectCCDS35771.1
International Mouse Knockout Project StatusCfap126
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000021658 VEGA Gene Model | MGI Sequence Detail 13050 C57BL/6J ±  kb
transcript OTTMUST00000051411 VEGA | MGI Sequence Detail 766 Not Applicable 
polypeptide OTTMUSP00000024184 VEGA | MGI Sequence Detail 233 Not Applicable 

For the selected sequences
All sequences(66) RefSeq(14) UniProt(12)
Polymorphisms
SNPs within 2kb(167 from dbSNP Build 137)
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:180887 Lange A, et al., Fltp(T2AiCre): A new knock-in mouse line for conditional gene targeting in distinct mono- and multiciliated tissues. Differentiation. 2012 Feb;83(2):S105-13
All references(27)
Other
accession IDs
MGI:2138531

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory