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Iqcf5 Gene Detail
Summary
  • Symbol
    Iqcf5
  • Name
    IQ motif containing F5
  • Synonyms
    1700007L12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922720
    NCBI Gene: 75470
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:106514573-106516003 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 57.68 cM, cytoband F1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    23 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922720
protein coding gene Chr9:106514573-106516010 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035238
protein coding gene Chr9:108328826-108330265 (+)
A/J MGP_AJ_G0035217
protein coding gene Chr9:104403107-104404546 (+)
AKR/J MGP_AKRJ_G0035149
protein coding gene Chr9:107007760-107009205 (+)
BALB/cJ MGP_BALBcJ_G0035211
protein coding gene Chr9:104091262-104092701 (+)
C3H/HeJ MGP_C3HHeJ_G0034921
protein coding gene Chr9:107419579-107421018 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035731
protein coding gene Chr9:111309387-111310824 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032628
protein coding gene Chr9:101893445-101894889 (+)
CAST/EiJ MGP_CASTEiJ_G0034232
protein coding gene Chr9:107330935-107332344 (+)
CBA/J MGP_CBAJ_G0034889
protein coding gene Chr9:115243415-115244852 (+)
DBA/2J MGP_DBA2J_G0035050
protein coding gene Chr9:103865318-103866757 (+)
FVB/NJ MGP_FVBNJ_G0034998
protein coding gene Chr9:102645525-102646970 (+)
LP/J MGP_LPJ_G0035126
protein coding gene Chr9:108543571-108545010 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035037
protein coding gene Chr9:116831206-116832645 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035752
protein coding gene Chr9:107259376-107260827 (+)
PWK/PhJ MGP_PWKPhJ_G0033939
protein coding gene Chr9:104169812-104171249 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033774
protein coding gene Chr9:107342626-107344067 (+)
WSB/EiJ MGP_WSBEiJ_G0034353
protein coding gene Chr9:107151752-107153191 (+)



Homology
more
  • Human Ortholog
    IQCF5, IQ motif containing F5
  • Vertebrate Orthologs
    7
  • Human Ortholog
    IQCF5, IQ motif containing F5
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 389124
    neXtProt AC: NX_A8MTL0
    UniProt: A8MTL0

  • Chr Location
    3p21.2; chr3:51873721-51875584 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 75470 NCBI Gene Model | MGI Sequence Detail 1431 C57BL/6J ±  kb
transcript NM_029300 RefSeq | MGI Sequence Detail 544 C57BL/6  
polypeptide Q9DAL7 UniProt | EBI | MGI Sequence Detail 148 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR039887 IQ domain-containing protein F
    IPR000048 IQ motif, EF-hand binding site
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 3
References
more
  • Summaries
    All 19
    Gene Ontology 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/26/2020
MGI 6.15
The Jackson Laboratory