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Spata19 Gene Detail
Summary
  • Symbol
    Spata19
  • Name
    spermatogenesis associated 19
  • Synonyms
    1700001L23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922719
    NCBI Gene: 75469
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:27396807-27401711 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 12.90 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    42 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922719
protein coding gene Chr9:27396800-27401785 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034509
protein coding gene Chr9:24883595-24888480 (+)
A/J MGP_AJ_G0034487
protein coding gene Chr9:24323999-24328884 (+)
AKR/J MGP_AKRJ_G0034413
protein coding gene Chr9:24803204-24808087 (+)
BALB/cJ MGP_BALBcJ_G0034478
protein coding gene Chr9:24204176-24209061 (+)
C3H/HeJ MGP_C3HHeJ_G0034190
protein coding gene Chr9:25184178-25189063 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034999
protein coding gene Chr9:25808256-25813141 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031929
protein coding gene Chr9:23228117-23233079 (+)
CAST/EiJ MGP_CASTEiJ_G0033513
protein coding gene Chr9:24989329-24994226 (+)
CBA/J MGP_CBAJ_G0034163
protein coding gene Chr9:26712602-26717487 (+)
DBA/2J MGP_DBA2J_G0034321
protein coding gene Chr9:24351345-24356230 (+)
FVB/NJ MGP_FVBNJ_G0034264
protein coding gene Chr9:23777516-23782401 (+)
LP/J MGP_LPJ_G0034407
protein coding gene Chr9:25076785-25081670 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034308
protein coding gene Chr9:28389615-28394500 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035019
protein coding gene Chr9:24802773-24807658 (+)
PWK/PhJ MGP_PWKPhJ_G0033218
protein coding gene Chr9:24255607-24260482 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033052
protein coding gene Chr9:24878748-24885524 (+)
WSB/EiJ MGP_WSBEiJ_G0033628
protein coding gene Chr9:24541589-24546482 (+)



Homology
more
  • Human Ortholog
    SPATA19, spermatogenesis associated 19
  • Vertebrate Orthologs
    7
  • Human Ortholog
    SPATA19, spermatogenesis associated 19
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CT132, SPAS1, spergen1
  • Links
    NCBI Gene ID: 219938
    neXtProt AC: NX_Q7Z5L4
    UniProt: Q7Z5L4

  • Chr Location
    11q25; chr11:133835930-133845538 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 75469 NCBI Gene Model | MGI Sequence Detail 4905 C57BL/6J ±  kb
transcript NM_029299 RefSeq | MGI Sequence Detail 711 C57BL/6  
polypeptide Q9DAQ9 UniProt | EBI | MGI Sequence Detail 154 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000015484 spermatogenesis-associated protein 19, mitochondrial
  • InterPro Domains
    IPR028219 Spermatogenesis-associated protein 19, mitochondrial
Molecular
Reagents
less
  • All nucleic 29
    cDNA 29

    Microarray probesets 2
Other
Accession IDs
less
MGI:2143258
References
more
  • Summaries
    All 22
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory