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Stpg4 Gene Detail
Summary
  • Symbol
    Stpg4
  • Name
    sperm tail PG rich repeat containing 4
  • Synonyms
    1700011E24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922717
    NCBI Gene: 75467
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:87389571-87427741 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 57.38 cM, cytoband E4
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    209 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922717
protein coding gene Chr17:87389570-87428081 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024102
protein coding gene Chr17:90775456-90818553 (-)
A/J MGP_AJ_G0024061
protein coding gene Chr17:87850718-87894564 (-)
AKR/J MGP_AKRJ_G0024030
protein coding gene Chr17:89327553-89370336 (-)
BALB/cJ MGP_BALBcJ_G0024062
protein coding gene Chr17:87701609-87744784 (-)
C3H/HeJ MGP_C3HHeJ_G0023827
protein coding gene Chr17:90199708-90243903 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024507
protein coding gene Chr17:93903312-93941651 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021946
protein coding gene Chr17:82992369-83033490 (-)
CAST/EiJ MGP_CASTEiJ_G0023306
protein coding gene Chr17:91031291-91078038 (-)
CBA/J MGP_CBAJ_G0023801
protein coding gene Chr17:97847367-97893051 (-)
DBA/2J MGP_DBA2J_G0023929
protein coding gene Chr17:86285637-86324211 (-)
FVB/NJ MGP_FVBNJ_G0023895
protein coding gene Chr17:85798713-85840099 (-)
LP/J MGP_LPJ_G0024013
protein coding gene Chr17:91559938-91610675 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023923
protein coding gene Chr17:97721566-97765148 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024552
protein coding gene Chr17:89844498-89889425 (-)
PWK/PhJ MGP_PWKPhJ_G0023051
protein coding gene Chr17:85929130-85968946 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022862
protein coding gene Chr17:86589447-86629967 (-)
WSB/EiJ MGP_WSBEiJ_G0023372
protein coding gene Chr17:90686929-90733075 (-)



Homology
more
  • Human Ortholog
    STPG4, sperm-tail PG-rich repeat containing 4
  • Vertebrate Orthologs
    7
  • Human Ortholog
    STPG4, sperm-tail PG-rich repeat containing 4
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C2orf61, GSE
  • Links
    NCBI Gene ID: 285051
    neXtProt AC: NX_Q8N801
    UniProt: Q8N801

  • Chr Location
    2p21; chr2:47086991-47155378 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    7 phenotype references
Male mice homozygous for a mutation are viable and show normal fertility.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000036557 Ensembl Gene Model | MGI Sequence Detail 38171 C57BL/6J ±  kb
transcript ENSMUST00000040609 Ensembl | MGI Sequence Detail 847 Not Applicable  
polypeptide ENSMUSP00000044250 Ensembl | MGI Sequence Detail 247 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 18
    cDNA 18

    Microarray probesets 10
References
more
  • Summaries
    All 29
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:254851 Hatanaka Y, et al., Histone H3 Methylated at Arginine 17 Is Essential for Reprogramming the Paternal Genome in Zygotes. Cell Rep. 2017 Sep 19;20(12):2756-2765

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/11/2018
MGI 6.13
The Jackson Laboratory