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Ccdc7b
Gene Detail
Symbol

Name
ID
Ccdc7b
coiled-coil domain containing 7B
MGI:1922703
Synonyms
1700008F21Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 8
76.17 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr8:129067134-129183732 bp, + strand
From VEGA annotation of GRCm38

  116599 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:49919  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog

HCOP human homology predictions: CCDC7
Gene Tree: Ccdc7b

Human
homologs
CCDC7, coiled-coil domain containing 7
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 79741
neXtProt AC: NX_Q96M83, NX_Q9H943

Human Synonyms: BIOT2, BioT2-A, BioT2-B, BioT2-C, C10orf68

Human Chr (Location): 10p11.22; chr10:32446082-32882864 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Gene trapped(1) Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Ccdc7b interacts with 108 markers (Mir9-1, Mir9-2, Mir9-3, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(3)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(3) cDNA(3)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000022627 (Evidence)
Ensembl Gene Model ENSMUSG00000056018 (Evidence)
Entrez Gene 75453 (Evidence)
DFCI TC1588949, TC1590913, TC1633616
DoTS DT.97401134, DT.101725089, DT.101335052, DT.101152693
NIA Mouse Gene Index U009996
Consensus CDS Project CCDS52713.1, CCDS52714.1
International Mouse Phenotyping Consortium Status Ccdc7b
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022627 VEGA Gene Model | MGI Sequence Detail 116599 C57BL/6J ±  kb
transcript OTTMUST00000054204 VEGA | MGI Sequence Detail 1447 Not Applicable 
polypeptide OTTMUSP00000025836 VEGA | MGI Sequence Detail 381 Not Applicable 

For the selected sequences
All sequences(55) RefSeq(8) UniProt(6)
Polymorphisms
SNPs within 2kb(316 from dbSNP Build 137)    SNPs within 2kb including multiple locations(348)
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(24)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory