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Cypt12 Gene Detail
Summary
  • Symbol
    Cypt12
  • Name
    cysteine-rich perinuclear theca 12
  • Synonyms
    1700001F04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922689
    NCBI Gene: 75439
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:17948444-17948952 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 4.98 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    35 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922689
protein coding gene Chr3:17948410-17948959 (+)
129S1/SvImJ MGP_129S1SvImJ_G0027086
protein coding gene Chr3:15128769-15129318 (+)
A/J MGP_AJ_G0027047
protein coding gene Chr3:15060507-15061056 (+)
AKR/J MGP_AKRJ_G0027016
protein coding gene Chr3:15158180-15158729 (+)
BALB/cJ MGP_BALBcJ_G0027059
protein coding gene Chr3:14836504-14837053 (+)
C3H/HeJ MGP_C3HHeJ_G0026799
protein coding gene Chr3:15225490-15226039 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027503
protein coding gene Chr3:16126555-16127104 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024865
protein coding gene Chr3:13299761-13300315 (+)
CAST/EiJ MGP_CASTEiJ_G0026255
protein coding gene Chr3:15185689-15186243 (+)
CBA/J MGP_CBAJ_G0026777
protein coding gene Chr3:16432612-16433161 (+)
DBA/2J MGP_DBA2J_G0026911
protein coding gene Chr3:14659633-14660182 (+)
FVB/NJ MGP_FVBNJ_G0026880
protein coding gene Chr3:14346591-14347140 (+)
LP/J MGP_LPJ_G0027023
protein coding gene Chr3:15744363-15744912 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026900
protein coding gene Chr3:18435396-18435945 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027562
protein coding gene Chr3:14937235-14937784 (+)
PWK/PhJ MGP_PWKPhJ_G0025988
protein coding gene Chr3:14419735-14420289 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025795
protein coding gene Chr3:14771828-14772382 (+)
WSB/EiJ MGP_WSBEiJ_G0026328
protein coding gene Chr3:15002691-15003240 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 75439 NCBI Gene Model | MGI Sequence Detail 509 C57BL/6J ±  kb
transcript NM_029289 RefSeq | MGI Sequence Detail 509 C57BL/6  
polypeptide NP_083565 RefSeq | MGI Sequence Detail 119 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR040245 Cysteine-rich perinuclear theca protein
Molecular
Reagents
less
  • All nucleic 26
    cDNA 26

    Microarray probesets 3
Other
Accession IDs
less
MGI:2139939
References
more
  • Summaries
    All 18
    Diseases 1
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:105251 Hansen MA, et al., Identification and expression profiling of 10 novel spermatid expressed CYPT genes. Mol Reprod Dev. 2006 Feb 13;73(5):568-579

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/11/2019
MGI 6.14
The Jackson Laboratory