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1700001C02Rik
Gene Detail
Symbol

Name
ID
1700001C02Rik
RIKEN cDNA 1700001C02 gene
MGI:1922684
Synonyms
1700047H18Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 5
16.57 cM, cytoband B1
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr5:30466047-30484088 bp, + strand
From VEGA annotation of GRCm38

  18042 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:49920  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: 1700001C02Rik

Human
homologs
Human Homolog C2orf70, chromosome 2 open reading frame 70
NCBI Gene ID 339778
neXtProt AC  NX_A6NJV1
Human Chr (Location)  2p23.3; chr2:26562559-26579527 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(6) : Gene trapped(2) Radiation induced(3) Targeted(1)
Genomic Mutations involving 1700001C02Rik (3)
Alleles Annotated to Human Diseases(1)   
Interactions
1700001C02Rik interacts with 47 markers (Mir23b, Mir29b-1, Mir29b-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component nucleus
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (37)    Tissues (31)    Images (16)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 37
cDNA source data(10)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(10) cDNA(10)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000022268 (Evidence)
Ensembl Gene ModelENSMUSG00000029182 (Evidence)
Entrez Gene75434 (Evidence)
UniGene332291
DFCITC1655950, TC1595498, TC1586230
DoTSDT.40145308, DT.50316419, DT.91582404
NIA Mouse Gene IndexU005417
Consensus CDS ProjectCCDS19158.1
International Mouse Knockout Project Status1700001C02Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022268 VEGA Gene Model | MGI Sequence Detail 18042 C57BL/6J ±  kb
transcript OTTMUST00000053030 VEGA | MGI Sequence Detail 731 Not Applicable 
polypeptide OTTMUSP00000025192 VEGA | MGI Sequence Detail 200 Not Applicable 

For the selected sequences
All sequences(32) RefSeq(4) UniProt(3)
Polymorphisms
SNPs within 2kb(129 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR018902 Uncharacterised protein family UPF0573/UPF0605
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(30)
Other
accession IDs
MGI:1920619

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory