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Arl5a Gene Detail
Summary
  • Symbol
    Arl5a
  • Name
    ADP-ribosylation factor-like 5A
  • Synonyms
    2410015N24Rik, 2810410P22Rik, Arl5
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922673
    NCBI Gene: 75423
Location & Maps
more
  • Sequence Map
    Chr2:52397951-52424901 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      26951 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 29.98 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    ARL5A, ADP ribosylation factor like GTPase 5A
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ARL5A, ADP ribosylation factor like GTPase 5A
    Orthology source: HomoloGene
  • Synonyms
    ARFLP5, ARL5
  • Links
    NCBI Gene ID: 26225
    neXtProt AC: NX_Q9Y689

  • Chr Location
    2q23.3; chr2:151800966-151828495 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Targeted
    4
  • Genomic Mutations
    1 involving Arl5a
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000012609 VEGA Gene Model | MGI Sequence Detail 26951 C57BL/6J ±  kb
transcript OTTMUST00000030032 VEGA | MGI Sequence Detail 5239 Not Applicable  
polypeptide OTTMUSP00000013501 VEGA | MGI Sequence Detail 179 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    185 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000004288 ADP-ribosylation factor-like protein 5A
  • InterPro Domains
    IPR027417 P-loop containing nucleoside triphosphate hydrolase
    IPR006689 Small GTPase superfamily, ARF/SAR type
    IPR024156 Small GTPase superfamily, ARF type
    IPR005225 Small GTP-binding protein domain
Molecular
Reagents
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  • All nucleic 12
    cDNA 12

    Microarray probesets 5
Other
Accession IDs
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MGI:1923807, MGI:2138755, MGI:2139406, MGI:2139547
References
more
  • Summaries
    All 27
    Developmental Gene Expression 3
    Gene Ontology 2
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:205051 Miller JA, et al., Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates. Development. 2013 Nov;140(22):4633-44

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory