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Arl5a Gene Detail
Summary
  • Symbol
    Arl5a
  • Name
    ADP-ribosylation factor-like 5A
  • Synonyms
    2410015N24Rik, 2810410P22Rik, Arl5
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922673
    NCBI Gene: 75423
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:52397949-52424874 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 29.98 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    185 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922673
protein coding gene Chr2:52397949-52424901 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025734
protein coding gene Chr2:51724819-51757890 (-)
A/J MGP_AJ_G0025710
protein coding gene Chr2:49731900-49758055 (-)
AKR/J MGP_AKRJ_G0025680
protein coding gene Chr2:51164622-51192140 (-)
BALB/cJ MGP_BALBcJ_G0025705
protein coding gene Chr2:49829562-49856754 (-)
C3H/HeJ MGP_C3HHeJ_G0025466
protein coding gene Chr2:51162178-51188808 (-)
C57BL/6NJ MGP_C57BL6NJ_G0026151
protein coding gene Chr2:53255565-53284085 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023557
protein coding gene Chr2:47713009-47740016 (-)
CAST/EiJ MGP_CASTEiJ_G0024931
protein coding gene Chr2:51270838-51299692 (-)
CBA/J MGP_CBAJ_G0025446
protein coding gene Chr2:55267424-55299274 (-)
DBA/2J MGP_DBA2J_G0025577
protein coding gene Chr2:49383188-49410523 (-)
FVB/NJ MGP_FVBNJ_G0025539
protein coding gene Chr2:49069741-49096961 (-)
LP/J MGP_LPJ_G0025665
protein coding gene Chr2:51607617-51637721 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025570
protein coding gene Chr2:56291376-56319048 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0026209
protein coding gene Chr2:51076454-51105407 (-)
PWK/PhJ MGP_PWKPhJ_G0024672
protein coding gene Chr2:49261263-49288415 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024478
protein coding gene Chr2:51297281-51323069 (-)
WSB/EiJ MGP_WSBEiJ_G0024998
protein coding gene Chr2:51365364-51394390 (-)



Homology
more
  • Human Ortholog
    ARL5A, ADP ribosylation factor like GTPase 5A
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ARL5A, ADP ribosylation factor like GTPase 5A
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ARFLP5, ARL5
  • Links
    NCBI Gene ID: 26225
    neXtProt AC: NX_Q9Y689
    UniProt: Q9Y689

  • Chr Location
    2q23.3; chr2:151800966-151828495 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 75423 NCBI Gene Model | MGI Sequence Detail 26926 C57BL/6J ±  kb
transcript NM_182994 RefSeq | MGI Sequence Detail 5212 C57BL/6  
polypeptide Q80ZU0 UniProt | EBI | MGI Sequence Detail 179 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 5
Other
Accession IDs
less
MGI:1923807, MGI:2138755, MGI:2139406, MGI:2139547
References
more
  • Summaries
    All 32
    Developmental Gene Expression 3
    Gene Ontology 4
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:237787 Liu X, et al., Decreased expression levels of Ifi genes is associated to the increased resistance to spontaneous arthritis disease in mice deficiency of IL-1RA. BMC Immunol. 2016 Aug 02;17(1):25

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory