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Arhgap12 Gene Detail
Summary
  • Symbol
    Arhgap12
  • Name
    Rho GTPase activating protein 12
  • Synonyms
    2810011M08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922665
    NCBI Gene: 75415
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:6024448-6136098 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 4.46 cM, cytoband A1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    527 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922665
protein coding gene Chr18:6024427-6136098 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024128
protein coding gene Chr18:2914298-3028747 (-)
A/J MGP_AJ_G0024090
protein coding gene Chr18:2894396-3011540 (-)
AKR/J MGP_AKRJ_G0024058
protein coding gene Chr18:2978440-3091305 (-)
BALB/cJ MGP_BALBcJ_G0024090
protein coding gene Chr18:2888027-3001297 (-)
C3H/HeJ MGP_C3HHeJ_G0023855
protein coding gene Chr18:2870224-2987229 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024535
protein coding gene Chr18:3077030-3216182 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021974
protein coding gene Chr18:2688427-2803500 (-)
CAST/EiJ MGP_CASTEiJ_G0023334
protein coding gene Chr18:2893293-3011923 (-)
CBA/J MGP_CBAJ_G0023829
protein coding gene Chr18:3027231-3138491 (-)
DBA/2J MGP_DBA2J_G0023957
protein coding gene Chr18:2810893-2923798 (-)
FVB/NJ MGP_FVBNJ_G0023923
protein coding gene Chr18:2781532-2893340 (-)
LP/J MGP_LPJ_G0024041
protein coding gene Chr18:2929246-3042517 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023951
protein coding gene Chr18:3095266-3215923 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024580
protein coding gene Chr18:2830654-2958117 (-)
PWK/PhJ MGP_PWKPhJ_G0023079
protein coding gene Chr18:2807379-2917775 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022890
protein coding gene Chr18:3141267-3271285 (-)
WSB/EiJ MGP_WSBEiJ_G0023400
protein coding gene Chr18:2880893-3005475 (-)



Homology
more
  • Human Ortholog
    ARHGAP12, Rho GTPase activating protein 12
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ARHGAP12, Rho GTPase activating protein 12
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 94134
    neXtProt AC: NX_Q8IWW6
    UniProt: Q8IWW6

  • Chr Location
    10p11.22; chr10:31805398-31928876 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    6 phenotype references
A null gene trap mutation resulted in no notable phenotype in homozygous mutant mice.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 75415 NCBI Gene Model | MGI Sequence Detail 111651 C57BL/6J ±  kb
transcript NM_001039692 RefSeq | MGI Sequence Detail 5034 C57BL/6  
polypeptide Q8C0D4 UniProt | EBI | MGI Sequence Detail 838 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 14
    cDNA 14

    Microarray probesets 6
References
more
  • Summaries
    All 31
    Developmental Gene Expression 3
    Gene Ontology 5
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:214438 Rudnicki A, et al., Next-generation sequencing of small RNAs from inner ear sensory epithelium identifies microRNAs and defines regulatory pathways. BMC Genomics. 2014;15:484

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory