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Ccnl1 Gene Detail
Summary
  • Symbol
    Ccnl1
  • Name
    cyclin L1
  • Synonyms
    2610030E23Rik, ania-6a
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922664
    NCBI Gene: 56706
  • Alliance
    genome feature page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:65853572-65865670 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 30.25 cM, cytoband E1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    284 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922664
 protein coding gene Chr3:65853333-65869451 (-)
129S1/SvImJ ENSMUSG00200001416
 protein coding gene Chr3:62606242-62618340 (-)
A/J ENSMUSG00195026112
 protein coding gene Chr3:62719470-62731568 (-)
AKR/J ENSMUSG00220024372
 protein coding gene Chr3:62731936-62744035 (-)
BALB/cJ ENSMUSG00180008191
 protein coding gene Chr3:62750371-62762471 (-)
C3H/HeJ ENSMUSG00175003267
 protein coding gene Chr3:62611715-62623813 (-)
C57BL/6NJ ENSMUSG00215006198
 protein coding gene Chr3:63080180-63092279 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025046
 protein coding gene Chr3:59581671-59594043 (-)
CAST/EiJ ENSTCUG00005002357
 protein coding gene Chr3:62322820-62334877 (-)
CBA/J ENSMUSG00210001746
 protein coding gene Chr3:62698063-62710162 (-)
DBA/2J ENSMUSG00185014555
 protein coding gene Chr3:62866820-62878919 (-)
FVB/NJ ENSMUSG00205003587
 protein coding gene Chr3:61868279-61880377 (-)
JF1/MsJ ENSUMUG00000000657
 protein coding gene Chr3:62528346-62540455 (-)
LP/J ENSMUSG00230001769
 protein coding gene Chr3:64890786-64902884 (-)
NOD/ShiLtJ ENSMUSG00190002893
 protein coding gene Chr3:63185543-63197640 (-)
NZO/HlLtJ ENSMUSG00225001539
 protein coding gene Chr3:67608546-67620644 (-)
PWK/PhJ ENSLUMG00010014714
 protein coding gene Chr3:62585040-62597145 (-)
SPRET/EiJ ENSMSPG00010007658
 protein coding gene Chr3:63056549-63068649 (-)
WSB/EiJ ENSIUOG00005015561
 protein coding gene Chr3:63121502-63133601 (-)



Homology
more
  • Human Ortholog
    CCNL1, cyclin L1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCNL1, cyclin L1
  • Synonyms
    ania-6a, ANIA6A, BM-001, PRO1073
  • Links
    NCBI Gene ID: 57018
    UniProt: Q9UK58

  • Chr Location
    3q25.31; chr3:157143121-157160760 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    15 phenotype references
  • All Mutations and Alleles
    12
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    5
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    4
  • Genomic Mutations
    2 involving Ccnl1
  • Incidental Mutations
    CvDC
  • Find Mice (IMSR)
    31 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    37
  • GO References
    14
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    598
  • Tissues
    1
  • cDNA Data
    11
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000027829 Ensembl Gene Model | MGI Sequence Detail 12099 C57BL/6J ±  kb
transcript ENSMUST00000029416 Ensembl | MGI Sequence Detail 2169 Not Applicable  
polypeptide ENSMUSP00000029416 Ensembl | MGI Sequence Detail 532 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 11
    Primer pair 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:2139871
References
more
  • Summaries
    All 52
    Developmental Gene Expression 2
    Diseases 1
    Gene Ontology 14
    Phenotypes 15
  • Earliest
    J:320163 Bunnell BA, et al., Increased expression of a 58-kDa protein kinase leads to changes in the CHO cell cycle. Proc Natl Acad Sci U S A. 1990 Oct;87(19):7467-71
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory