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Ccnl1
Gene Detail
 Symbol
Name
ID
Ccnl1
cyclin L1
MGI:1922664
Synonyms 2610030E23Rik, ania-6a
Feature Type protein coding gene
Genetic Map
Chromosome 3
30.25 cM, cytoband E1
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr3:65946151-65958249 bp, - strand
From VEGA annotation of GRCm38

  12099 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:10541  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 chicken; 1 zebrafish

Protein SuperFamily: cyclin, L type
Gene Tree: Ccnl1

Human
homologs
Human Homolog CCNL1, cyclin L1
NCBI Gene ID 57018
neXtProt AC  NX_Q9UK58
Human Synonyms  ania-6a, ANIA6A, PRO1073
Human Chr (Location)  3q25.31; chr3:157146364-157160693 (-)  GRCh38
Alleles
and
phenotypes
All alleles(6) : Gene trapped(2) Targeted(4)
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process regulation of cyclin-dependent protein serine/threonine kinase activity, regulation of transcription, DNA-templated, ...
Component cytoplasm, nuclear speck, ...
Function protein binding, protein kinase binding
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (1)    Tissues (1)   
Theiler Stages: 13
Assay TypeResults
RT-PCR 1
cDNA source data(10)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(11) cDNA(10) Primer pair(1)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000029434 (Evidence)
Ensembl Gene ModelENSMUSG00000027829 (Evidence)
Entrez Gene56706 (Evidence)
DFCITC1575685, TC1582650, TC1603111, TC1648450, TC1678920
DoTSDT.101409001, DT.103553032, DT.40144194, DT.91281201, DT.94339717, DT.94339725
NIA Mouse Gene IndexU024119
Consensus CDS ProjectCCDS17390.1
International Mouse Knockout Project StatusCcnl1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000029434 VEGA Gene Model | MGI Sequence Detail 12099 C57BL/6J ±  kb
transcript OTTMUST00000072934 VEGA | MGI Sequence Detail 2169 Not Applicable 
polypeptide OTTMUSP00000037667 VEGA | MGI Sequence Detail 532 Not Applicable 

For the selected sequences
All sequences(104) RefSeq(21) UniProt(6)
Polymorphisms SNPs within 2kb(39 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR015429 Cyclin C/H/T/L
InterPro IPR017060 Cyclin L
InterPro IPR013763 Cyclin-like
InterPro IPR015431 Cyclin L, metazoa/fungi
InterPro IPR006671 Cyclin, N-terminal
Protein Ontology PR:000005136 cyclin-L1
References (Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(38)
Other
accession IDs
MGI:2139871

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory