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4930597O21Rik Gene Detail
Summary
  • Symbol
    4930597O21Rik
  • Name
    RIKEN cDNA 4930597O21 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1922623
    NCBI Gene: 75373
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:66871636-66873505 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 30.68 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    7 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922623
lncRNA gene Chr6:66870619-66901160 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015638
unclassified non-coding RNA gene Chr6:66861303-66864213 (-)
A/J MGP_AJ_G0015614
unclassified non-coding RNA gene Chr6:63984478-63986315 (-)
AKR/J MGP_AKRJ_G0015577
unclassified non-coding RNA gene Chr6:65982601-65985818 (-)
BALB/cJ MGP_BALBcJ_G0015576
unclassified non-coding RNA gene Chr6:64349209-64351221 (-)
C3H/HeJ MGP_C3HHeJ_G0015404
unclassified non-coding RNA gene Chr6:118158628-118160448 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016029
unclassified non-coding RNA gene Chr6:68458784-68460631 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013762
unclassified non-coding RNA gene Chr6:61159713-61161471 (-)
CAST/EiJ MGP_CASTEiJ_G0014954
unclassified non-coding RNA gene Chr6:66272312-66274125 (-)
CBA/J MGP_CBAJ_G0015379
unclassified non-coding RNA gene Chr6:71297743-71299515 (-)
DBA/2J MGP_DBA2J_G0015473
unclassified non-coding RNA gene Chr6:63638739-63640640 (-)
FVB/NJ MGP_FVBNJ_G0015480
unclassified non-coding RNA gene Chr6:63150551-63152356 (-)
LP/J MGP_LPJ_G0015554
unclassified non-coding RNA gene Chr6:66784025-66786716 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015503
unclassified non-coding RNA gene Chr6:75000074-75002724 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016071
unclassified non-coding RNA gene Chr6:65899351-65902217 (-)
PWK/PhJ MGP_PWKPhJ_G0014737
unclassified non-coding RNA gene Chr6:62837484-62839709 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014525
unclassified non-coding RNA gene Chr6:65471206-65472969 (-)
WSB/EiJ MGP_WSBEiJ_G0015058
unclassified non-coding RNA gene Chr6:66219072-66220880 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000053442 Ensembl Gene Model | MGI Sequence Detail 1870 C57BL/6J ±  kb
transcript ENSMUST00000065878 Ensembl | MGI Sequence Detail 984 Not Applicable  
polypeptide Q8C2X6 UniProt | EBI | MGI Sequence Detail 171 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 12
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/26/2022
MGI 6.22
The Jackson Laboratory