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Etnk1
Gene Detail
Symbol

Name
ID
Etnk1
ethanolamine kinase 1
MGI:1922570
Synonyms
1110061E11Rik, 4930555L11Rik, D6Ertd3e, EKI1
Feature Type
protein coding gene
Genetic Map
Chromosome 6
75.41 cM
Detailed Genetic Map ± 1 cM


Mapping data(4)
Sequence Map
Chr6:143167230-143208542 bp, + strand
From Ensembl annotation of GRCm38

  41313 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:10240  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

HCOP human homology predictions: ETNK1
Gene Tree: Etnk1

Human
homologs
ETNK1, ethanolamine kinase 1
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 55500
neXtProt AC: NX_Q9HBU6

Human Synonyms: EKI, EKI1, EKI 1, Nbla10396

Human Chr (Location): 12p12.1; chr12:22625142-22690674 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(29) : Gene trapped(26) Targeted(3)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Etnk1 interacts with 431 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (13 annotations)
Process lipid metabolic process, phosphatidylethanolamine biosynthetic process, ...
Component cytoplasm, membrane, ...
Function ATP binding, ethanolamine kinase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (5 records)
Data Summary: Results (95)    Tissues (19)    Images (20)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 59
RT-PCR 36
cDNA source data(23)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: ZFIN etnk1    NEW 
Molecular
reagents
All nucleic(28) cDNA(24) Primer pair(3) Other(1)
Microarray probesets(8)
Other database
links
Ensembl Gene Model ENSMUSG00000030275 (Evidence)
Entrez Gene 75320 (Evidence)
DFCI TC1704125, TC1628431, TC1613004, TC1597239
NIA Mouse Gene Index U007547, U264926
EC 2.7.1.82
Consensus CDS Project CCDS57468.1
International Mouse Phenotyping Consortium Status Etnk1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000030275 Ensembl Gene Model | MGI Sequence Detail 41313 C57BL/6J ±  kb
transcript ENSMUST00000032413 Ensembl | MGI Sequence Detail 6429 Not Applicable 
polypeptide ENSMUSP00000032413 Ensembl | MGI Sequence Detail 363 Not Applicable 

For the selected sequences
All sequences(45) RefSeq(7) UniProt(3)
Polymorphisms
SNPs within 2kb(359 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR011009 Protein kinase-like domain
References
(Earliest) J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
(Latest) J:215544 Bogdanovic E, et al., IDH1 regulates phospholipid metabolism in developing astrocytes. Neurosci Lett. 2014 Oct 17;582:87-92
All references(47)
Other
accession IDs
MGI:1098799, MGI:1353584, MGI:1916076, MGI:2141483, MGI:2141764

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory