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Tmco5b Gene Detail
Summary
  • Symbol
    Tmco5b
  • Name
    transmembrane and coiled-coil domains 5B
  • Synonyms
    4930563P21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922525
    NCBI Gene: 75275
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:113285732-113297190 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 57.30 cM, cytoband E4
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    111 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922525
protein coding gene Chr2:113285095-113297190 (+)
129S1/SvImJ MGP_129S1SvImJ_G0026295
protein coding gene Chr2:115762173-115775911 (+)
A/J MGP_AJ_G0026256
protein coding gene Chr2:111028048-111039655 (+)
AKR/J MGP_AKRJ_G0026235
protein coding gene Chr2:114133237-114146082 (+)
BALB/cJ MGP_BALBcJ_G0026269
protein coding gene Chr2:111272851-111285263 (+)
C3H/HeJ MGP_C3HHeJ_G0026014
protein coding gene Chr2:114541251-114558385 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026716
protein coding gene Chr2:119578343-119591155 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024096
protein coding gene Chr2:106223066-106234622 (+)
CAST/EiJ MGP_CASTEiJ_G0025477
protein coding gene Chr2:114826534-114842209 (+)
CBA/J MGP_CBAJ_G0025991
protein coding gene Chr2:123774699-123789259 (+)
DBA/2J MGP_DBA2J_G0026130
protein coding gene Chr2:110502422-110514545 (+)
FVB/NJ MGP_FVBNJ_G0026092
protein coding gene Chr2:109355600-109366992 (+)
LP/J MGP_LPJ_G0026231
protein coding gene Chr2:116054415-116067109 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026111
protein coding gene Chr2:128143330-128162784 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0026771
protein coding gene Chr2:114197240-114213484 (+)
PWK/PhJ MGP_PWKPhJ_G0025213
protein coding gene Chr2:109999051-110010974 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025012
protein coding gene Chr2:113358863-113371233 (+)
WSB/EiJ MGP_WSBEiJ_G0025546
protein coding gene Chr2:115013526-115029625 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    4
  • Genomic Mutations
    2 involving Tmco5b
  • Incidental Mutations
    APF , CvDC
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000041255 Ensembl Gene Model | MGI Sequence Detail 11459 C57BL/6J ±  kb
transcript ENSMUST00000040856 Ensembl | MGI Sequence Detail 1237 Not Applicable  
polypeptide ENSMUSP00000042247 Ensembl | MGI Sequence Detail 307 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000032597 transmembrane and coiled-coil domain-containing protein 5B
  • InterPro Domains
    IPR026617 Transmembrane and coiled-coil domain-containing protein 2/5
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 24
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:123068 Pavel E, et al., Analysis of a new allele of limb deformity (ld) reveals tissue- and age-specific transcriptional effects of the Ld Global Control Region. Int J Dev Biol. 2007;51(4):273-81

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/18/2019
MGI 6.14
The Jackson Laboratory