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4930553M12Rik Gene Detail
Summary
  • Symbol
    4930553M12Rik
  • Name
    RIKEN cDNA 4930553M12 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1922496
    NCBI Gene: 75246
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr4:88867233-88868380 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 42.04 cM, cytoband C4
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    29 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922496
lncRNA gene Chr4:88867233-88868380 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028438
protein coding gene Chr4:88772338-88772835 (-)
A/J MGP_AJ_G0028400
protein coding gene Chr4:85674030-85674527 (-)
AKR/J MGP_AKRJ_G0028348
protein coding gene Chr4:87789973-87790470 (-)
BALB/cJ MGP_BALBcJ_G0028419
protein coding gene Chr4:85889813-85890310 (-)
C3H/HeJ MGP_C3HHeJ_G0028131
protein coding gene Chr4:88515259-88515756 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028858
protein coding gene Chr4:92159866-92160363 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026153
protein coding gene Chr4:81622977-81623474 (-)
CAST/EiJ MGP_CASTEiJ_G0027572
protein coding gene Chr4:86356880-86357377 (-)
CBA/J MGP_CBAJ_G0028101
protein coding gene Chr4:95005627-95006124 (-)
DBA/2J MGP_DBA2J_G0028251
protein coding gene Chr4:85433394-85433891 (-)
FVB/NJ MGP_FVBNJ_G0028218
protein coding gene Chr4:84372032-84372529 (-)
LP/J MGP_LPJ_G0028351
protein coding gene Chr4:89067206-89067703 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028247
protein coding gene Chr4:99990469-99990966 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028896
protein coding gene Chr4:87933818-87934315 (-)
PWK/PhJ MGP_PWKPhJ_G0027296
protein coding gene Chr4:83721624-83722121 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027117
protein coding gene Chr4:85452429-85452927 (-)
WSB/EiJ MGP_WSBEiJ_G0027650
protein coding gene Chr4:88137626-88138123 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000054351 Ensembl Gene Model | MGI Sequence Detail 1148 C57BL/6J ±  kb
transcript ENSMUST00000232970 Ensembl | MGI Sequence Detail 1148 Not Applicable  
polypeptide Q9CUH1 UniProt | EBI | MGI Sequence Detail 165 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 3
References
more
  • Summaries
    All 13
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/04/2020
MGI 6.15
The Jackson Laboratory